2YRQ

Solution structure of the tandem HMG box domain from Human High mobility group protein B1

• PDB DOI: https://doi.org/10.2210/pdb2YRQ/pdb
• BMRB: 11147

• Classification: DNA BINDING PROTEIN
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2007-04-02 Released: 2008-02-12 
• Deposition Author(s): Tomizawa, T., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function 

Literature

Solution structure of the tandem HMG box domain from Human High mobility group protein B1

Tomizawa, T., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 19.67 kDa 
• Atom Count: 1,378 
• Modelled Residue Count: 173 
• Deposited Residue Count: 173 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
High mobility group protein B1	A	173	Homo sapiens	Mutation(s): 0  Gene Names: HMGB1
UniProt & NIH Common Fund Data Resources
Find proteins for P09429 (Homo sapiens) Explore P09429  Go to UniProtKB:  P09429
PHAROS:  P09429 GTEx:  ENSG00000189403

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2008-02-12 
Deposition Author(s): Tomizawa, T., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2008-02-12
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2022-03-16
  Changes: Data collection, Database references, Derived calculations
• Version 1.3: 2024-05-29
  Changes: Data collection