Identification of Novel Allosteric Inhibitors of Hepatitis C Virus Ns5B Polymerase Thumb Domain (Site II) by Structure-Based Design
Di Francesco, M.E., Di Marco, S., Summa, V.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
RNA-DIRECTED RNA POLYMERASE | 536 | Hepacivirus hominis | Mutation(s): 0  EC: 2.7.7.48 | ![]() | |
UniProt | |||||
Find proteins for P26663 (Hepatitis C virus genotype 1b (isolate BK)) Explore P26663  Go to UniProtKB:  P26663 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P26663 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
QQ3 Query on QQ3 | B [auth A], C [auth A], D [auth A] | (3R)-3-(4-METHYL-1,3-DIOXO-1,3-DIHYDRO-2H-PYRROLO[3,4-C]QUINOLIN-2-YL)HEXANOIC ACID C18 H18 N2 O4 AZYBNXOGXCANBA-LLVKDONJSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 66.764 | α = 90 |
b = 96.175 | β = 90 |
c = 95.683 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
DENZO | data reduction |
SCALEPACK | data scaling |
AMoRE | phasing |