2RQ5 | pdb_00002rq5

Solution structure of the AT-rich interaction domain (ARID) of Jumonji/JARID2

PDB DOI: https://doi.org/10.2210/pdb2RQ5/pdb

Classification: TRANSCRIPTION
Organism(s): Mus musculus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2009-02-06 Released: 2009-06-09
Deposition Author(s): Kusunoki, H., Kohno, T.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

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This is version 1.3 of the entry. See complete history.

Literature

Solution structure of the AT-rich interaction domain of Jumonji/JARID2

Kusunoki, H., Takeuchi, T., Kohno, T.

(2009) Proteins 76: 1023-1028

PubMed: 19455710 Search on PubMed
DOI: https://doi.org/10.1002/prot.22449
Primary Citation Related Structures:
2RQ5

Organizational Affiliation

Mitsubishi Kagaku Institute of Life Sciences (MITILS), Machida, Tokyo 194-8511, Japan.

Macromolecule Content

Total Structure Weight: 13.98 kDa
Atom Count: 975
Modeled Residue Count: 121
Deposited Residue Count: 121
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein Jumonji	A	121	Mus musculus	Mutation(s): 0 Gene Names: Jmj
UniProt & NIH Common Fund Data Resources
Find proteins for Q62315 (Mus musculus) Explore Q62315 Go to UniProtKB: Q62315
IMPC: MGI:104813
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q62315
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2009-06-09

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2009-06-09
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2022-03-16
Changes: Data collection, Database references, Derived calculations
Version 1.3: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.