2PJI

Solution structure of rhodostomin P48A mutant

• PDB DOI: https://doi.org/10.2210/pdb2PJI/pdb
• Entry: 2PJI supersedes: 1XAZ
• BMRB: 7400

• Classification: HYDROLASE
• Organism(s): Calloselasma rhodostoma
• Expression System: Komagataella pastoris
• Mutation(s): Yes 


• Deposited: 2007-04-16 Released: 2007-05-08 
• Deposition Author(s): Chuang, W.-J., Liu, Y.-C., Shiu, J.-H.

---

Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

Dynamic Properties of the RGD Motif of Disintegrin Modulate its Recognition to Integrin a5b1

Chuang, W.-J., Chen, C.-Y., Shiu, J.-H., Liu, Y.-C., Hsieh, Y.-H., Chang, Y.-T., Chen, Y.-C., Lo, S.-J.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 7.32 kDa 
• Atom Count: 498 
• Modelled Residue Count: 68 
• Deposited Residue Count: 68 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Rhodostoxin-disintegrin rhodostomin	A	68	Calloselasma rhodostoma	Mutation(s): 1  Gene Names: RHOD EC: 3.4.24
UniProt
Find proteins for P30403 (Calloselasma rhodostoma) Explore P30403  Go to UniProtKB:  P30403

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-05-08 
Deposition Author(s): Chuang, W.-J., Liu, Y.-C., Shiu, J.-H.
• This entry supersedes: 1XAZ

Revision History  

• Version 1.0: 2007-05-08
  Type: Initial release
  
• Version 1.1: 2008-05-01
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2021-11-10
  Changes: Data collection, Database references, Derived calculations
• Version 1.4: 2024-10-30
  Changes: Data collection, Structure summary