2OS6 | pdb_00002os6

Solution structure of LARG PDZ domain in complex with C-terminal octa-peptide of Plexin B1

PDB DOI: https://doi.org/10.2210/pdb2OS6/pdb

Classification: CELL ADHESION
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2007-02-05 Released: 2008-02-12
Deposition Author(s): Liu, J., Huang, H., Yang, Y.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

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This is version 1.3 of the entry. See complete history.

Literature

Solution structure of the LARG PDZ domain in complex with C-terminal peptide of Plexin B1

Liu, J., Huang, H., Yang, Y.

To be published.

Macromolecule Content

Total Structure Weight: 10.29 kDa
Atom Count: 720
Modeled Residue Count: 97
Deposited Residue Count: 97
Unique protein chains: 2

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Rho guanine nucleotide exchange factor 12	A	89	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NZN5 (Homo sapiens) Explore Q9NZN5 Go to UniProtKB: Q9NZN5
PHAROS: Q9NZN5 GTEx: ENSG00000196914
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9NZN5
Sequence Annotations Expand
Reference Sequence

Find similar proteins by: Sequence | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
C-terminal peptide of Plexin-B1	B	8	N/A	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for O43157 (Homo sapiens) Explore O43157 Go to UniProtKB: O43157
PHAROS: O43157 GTEx: ENSG00000164050
Entity Groups
UniProt Group	O43157
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2008-02-12

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2008-02-12
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2022-03-16
Changes: Database references, Derived calculations
Version 1.3: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.