2OGP | pdb_00002ogp

Solution structure of the second PDZ domain of Par-3


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation 3D Report Full Report

Validation slider image for 2OGP

This is version 1.3 of the entry. See complete history

Literature

PDZ domains of par-3 as potential phosphoinositide signaling integrators

Wu, H.Feng, W.Chen, J.Chan, L.-N.Huang, S.Zhang, M.

(2007) Mol Cell 28: 886-898

  • DOI: https://doi.org/10.1016/j.molcel.2007.10.028
  • Primary Citation Related Structures: 
    2OGP

  • PubMed Abstract: 

    Multiple PDZ domain scaffold protein Par-3 and phosphoinositides (PIPs) are required for polarity in diverse cell types. We show that the second PDZ domain of Par-3 binds to phosphatidylinositol (PI) lipid membranes with high affinity. We further demonstrate that a large subset of PDZ domains in mammalian genomes are capable of binding to PI lipid membranes, indicating that lipid binding is the second most prevalent interaction mode of PDZ domains known to date. The biochemical and structural basis of Par-3 PDZ2-mediated membrane interaction is characterized in detail. The membrane binding capacity of Par-3 PDZ2 is critical for epithelial cell polarization. Interestingly, the lipid phosphatase PTEN directly binds to the third PDZ domain of Par-3. The concatenation of the PIP-binding PDZ2 and the lipid phosphatase PTEN-binding PDZ3 endows Par-3 as an ideal scaffold protein for integrating PIP signaling events during cellular polarization.


  • Organizational Affiliation
    • Department of Biochemistry, Molecular Neuroscience Center, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong, P.R. China.

Macromolecule Content 

  • Total Structure Weight: 10.47 kDa 
  • Atom Count: 733 
  • Modeled Residue Count: 97 
  • Deposited Residue Count: 97 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Partitioning-defective 3 homolog97Rattus norvegicusMutation(s): 0 
UniProt
Find proteins for Q9Z340 (Rattus norvegicus)
Explore Q9Z340 
Go to UniProtKB:  Q9Z340
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9Z340
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2007-12-25
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2022-03-16
    Changes: Database references, Derived calculations
  • Version 1.3: 2023-12-27
    Changes: Data collection