2M4N | pdb_00002m4n

Solution structure of the putative Ras interaction domain of AFD-1, isoform a from Caenorhabditis elegans

• PDB DOI: https://doi.org/10.2210/pdb2M4N/pdb
• BMRB: 19014

• Classification: UNKNOWN FUNCTION
• Organism(s): Caenorhabditis elegans
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2013-02-07 Released: 2013-03-20 
• Deposition Author(s): Harris, R., Hillerich, B., Ahmed, M., Bonanno, J.B., Chamala, S., Evans, B., Lafleur, J., Hammonds, J., Washington, E., Stead, M., Love, J., Attonito, J., Seidel, R.D., Liddington, R.C., Weis, W.I., Nelson, W.J., Girvin, M.E., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC), Assembly, Dynamics and Evolution of Cell-Cell and Cell-Matrix Adhesions (CELLMAT)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: 20 structures for lowest energy 

Literature

Solution structure of the putative Ras interaction domain of AFD-1, isoform a from Caenorhabditis elegans

Harris, R., Hillerich, B., Ahmed, M., Bonanno, J.B., Chamala, S., Evans, B., Lafleur, J., Hammonds, J., Washington, E., Stead, M., Love, J., Attonito, J., Seidel, R.D., Chook, Y.M., Rout, M.P., Liddington, R.C., Weis, W.I., Nelson, W.J., Girvin, M.E., Almo, S.C.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 11.97 kDa 
• Atom Count: 840 
• Modeled Residue Count: 108 
• Deposited Residue Count: 108 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein AFD-1, isoform a	A	108	Caenorhabditis elegans	Mutation(s): 0  Gene Names: afd-1, W03F11.6
UniProt
Find proteins for Q9BIC1 (Caenorhabditis elegans) Explore Q9BIC1  Go to UniProtKB:  Q9BIC1

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: 20 structures for lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-03-20 
Deposition Author(s): Harris, R., Hillerich, B., Ahmed, M., Bonanno, J.B., Chamala, S., Evans, B., Lafleur, J., Hammonds, J., Washington, E., Stead, M., Love, J., Attonito, J., Seidel, R.D., Liddington, R.C., Weis, W.I., Nelson, W.J., Girvin, M.E., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC), Assembly, Dynamics and Evolution of Cell-Cell and Cell-Matrix Adhesions (CELLMAT)

Revision History  

• Version 1.0: 2013-03-20
  Type: Initial release
  
• Version 1.1: 2023-06-14
  Changes: Data collection, Database references, Other
• Version 1.2: 2024-05-15
  Changes: Data collection, Database references