2LZY | pdb_00002lzy

Solution NMR structure of asteropsin c from a marine sponge asteropus sp.

PDB DOI: https://doi.org/10.2210/pdb2LZY/pdb
BMRB: 18784

Classification: TOXIN
Organism(s): Asteropus
Mutation(s): No

Deposited: 2012-10-12 Released: 2013-10-23
Deposition Author(s): Li, H., Bowling, J.J., Hamann, M.T., Jung, J.H.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2LZY

This is version 2.2 of the entry. See complete history.

Literature

Sponge Derived Linear Knottins as a Novel Scaffold for Oral Peptide Drug Administration

Li, H., Bowling, J.J., Su, M., Hong, J., Lee, B., Kang, H., Hamann, M.T., Jung, J.H.

To be published.

Macromolecule Content

Total Structure Weight: 3.77 kDa
Atom Count: 260
Modeled Residue Count: 35
Deposited Residue Count: 35
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
ABU8-3	A	35	Asteropus	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
Sequence Annotations Expand
Reference Sequence

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
PCA Query on PCA	A	L-PEPTIDE LINKING	C₅ H₇ N O₃		GLN

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2013-10-23

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2013-10-23
Type: Initial release
Version 2.0: 2019-12-25
Changes: Derived calculations, Polymer sequence
Version 2.1: 2023-06-14
Changes: Database references, Other
Version 2.2: 2024-10-09
Changes: Data collection, Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.