2LW6 | pdb_00002lw6

Solution structure of an avirulence protein AvrPiz-t from pathogen Magnaportheoryzae

PDB DOI: https://doi.org/10.2210/pdb2LW6/pdb
BMRB: 18607

Classification: APOPTOSIS
Organism(s): Pyricularia oryzae
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2012-07-23 Released: 2012-09-12
Deposition Author(s): Zhang, Z.-M., Zhang, X., Zhou, Z., Hu, H., Liu, M., Zhou, B., Zhou, J.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2LW6

This is version 1.2 of the entry. See complete history.

Literature

Solution structure of the Magnaporthe oryzae avirulence protein AvrPiz-t.

Zhang, Z.-M., Zhang, X., Zhou, Z.R., Hu, H.Y., Liu, M., Zhou, B., Zhou, J.

(2013) J Biomol NMR 55: 219-223

PubMed: 23334361 Search on PubMed
DOI: https://doi.org/10.1007/s10858-012-9695-5
Primary Citation Related Structures:
2LW6

Organizational Affiliation

State Key Laboratory of Bio-organic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai, 200032, China.

Macromolecule Content

Total Structure Weight: 8.75 kDa
Atom Count: 615
Modeled Residue Count: 80
Deposited Residue Count: 80
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
AvrPiz-t protein	A	80	Pyricularia oryzae	Mutation(s): 0 Gene Names: 7bg7.13
UniProt
Find proteins for H2DQR0 (Pyricularia oryzae) Explore H2DQR0 Go to UniProtKB: H2DQR0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	H2DQR0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2012-09-12

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2012-09-12
Type: Initial release
Version 1.1: 2013-03-13
Changes: Database references
Version 1.2: 2024-10-16
Changes: Data collection, Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.