2LU1 | pdb_00002lu1

pfsub2 solution NMR structure

• PDB DOI: https://doi.org/10.2210/pdb2LU1/pdb
• BMRB: 18504

• Classification: HYDROLASE
• Organism(s): Plasmodium falciparum
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2012-06-06 Released: 2012-10-03 
• Deposition Author(s): He, Y., Chen, Y., Ruan, B., O'Brochta, D., Bryan, P., Orban, J.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 500 
• Conformers Submitted: 20 
• Selection Criteria: structures with acceptable covalent geometry 

Literature

Solution NMR structure of a sheddase inhibitor prodomain from the malarial parasite Plasmodium falciparum.

He, Y., Chen, Y., Oganesyan, N., Ruan, B., O'Brochta, D., Bryan, P.N., Orban, J.

(2012) Proteins 80: 2810-2817

• PubMed: 23011838 
• DOI: https://doi.org/10.1002/prot.24187
• Primary Citation Related Structures: 
  2LU1


• PubMed Abstract: 
  

  Plasmodium subtilisin 2 (Sub2) is a multidomain protein that plays an important role in malaria infection. Here, we describe the solution NMR structure of a conserved region of the inhibitory prodomain of Sub2 from Plasmodium falciparum, termed prosub2. Despite the absence of any detectable sequence homology, the protozoan prosub2 has structural similarity to bacterial and mammalian subtilisin-like prodomains. Comparison with the three-dimensional structures of these other prodomains suggests a likely binding interface with the catalytic domain of Sub2 and provides insights into the locations of primary and secondary processing sites in Plasmodium prodomains.

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Organizational Affiliation: 
• Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, MD 20850, USA.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 17.72 kDa 
• Atom Count: 742 
• Modeled Residue Count: 89 
• Deposited Residue Count: 149 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Subtilase	A	149	Plasmodium falciparum	Mutation(s): 0  Gene Names: sub-2 EC: 3.4.21.62
UniProt
Find proteins for O97364 (Plasmodium falciparum) Explore O97364  Go to UniProtKB:  O97364

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 500 
• Conformers Submitted: 20 
• Selection Criteria: structures with acceptable covalent geometry 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2012-10-03 
Deposition Author(s): He, Y., Chen, Y., Ruan, B., O'Brochta, D., Bryan, P., Orban, J.

Revision History  

• Version 1.0: 2012-10-03
  Type: Initial release
  
• Version 1.1: 2012-10-10
  Changes: Database references
• Version 1.2: 2012-11-14
  Changes: Database references
• Version 1.3: 2024-05-01
  Changes: Data collection, Database references