2LPV | pdb_00002lpv

Solution Structure of FKBP12 from Aedes aegypti

• PDB DOI: https://doi.org/10.2210/pdb2LPV/pdb
• BMRB: 18278

• Classification: ISOMERASE
• Organism(s): Aedes aegypti
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2012-02-20 Released: 2013-02-06 
• Deposition Author(s): Chakraborty, G., Shin, J.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

Solution structure of FK506-binding protein 12 from Aedes aegypti.

Chakraborty, G., Shin, J., Nguyen, Q.T., Harikishore, A., Baek, K., Yoon, H.S.

(2012) Proteins 80: 2476-2481

• PubMed: 22806993 
• DOI: https://doi.org/10.1002/prot.24146
• Primary Citation Related Structures: 
  2LPV


• PubMed Abstract: 
  

  Dengue remains one of the major public concerns as the virus eludes the immune response. Currently, no vaccines or antiviral therapeutics are available for dengue prevention or treatment. Immunosuppressive drug FK506 shows an antimalarial activity, and its molecular target, FK506-binding protein (FKBP), was identified in human Plasmodium parasites. Likewise, a conserved FKBP family protein has also been identified in Aedes aegypti (AaFKBP12), which is expected to play a similar role in the life cycle of Aedes aegypti, the primary vector of dengue virus infection. As FKBPs belong to a highly conserved class of immunophilin family and are involved in key biological regulations, they are considered as attractive pharmacological targets. In this study, we have determined the nuclear magnetic resonance solution structure of AaFKBP12, a novel FKBP member from Aedes aegypti, and presented its structural features, which may facilitate the design of potential inhibitory ligands against the dengue-transmitting mosquitoes.

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Organizational Affiliation: 
• Division of Structural Biology and Biochemistry, School of Biological Science, Nanyang Technological University, Singapore.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 11.55 kDa 
• Atom Count: 812 
• Modeled Residue Count: 108 
• Deposited Residue Count: 108 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
FKBP-type peptidyl-prolyl cis-trans isomerase	A	108	Aedes aegypti	Mutation(s): 0  Gene Names: AAEL007883, AaeL_AAEL007883 EC: 5.2.1.8
UniProt
Find proteins for Q1HR83 (Aedes aegypti) Explore Q1HR83  Go to UniProtKB:  Q1HR83

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-02-06 
Deposition Author(s): Chakraborty, G., Shin, J.

Revision History  

• Version 1.0: 2013-02-06
  Type: Initial release
  
• Version 1.1: 2023-06-14
  Changes: Data collection, Database references, Other
• Version 1.2: 2024-05-15
  Changes: Data collection, Database references