2KT0

Solution structure of human stem cell transcription factor Nanog homeodomain fragment

• PDB DOI: https://doi.org/10.2210/pdb2KT0/pdb
• BMRB: 16680

• Classification: Transcription regulation
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2010-01-15 Released: 2010-02-02 
• Deposition Author(s): Sahu, S.C., Markley, J.L., Center for Eukaryotic Structural Genomics (CESG)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Literature

Solution structure of human stem cell transcription factor Nanog

Sahu, S.C., Markley, J.L.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 10.07 kDa 
• Atom Count: 706 
• Modelled Residue Count: 84 
• Deposited Residue Count: 84 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Homeobox protein NANOG	A	84	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q9H9S0 (Homo sapiens) Explore Q9H9S0  Go to UniProtKB:  Q9H9S0
PHAROS:  Q9H9S0 GTEx:  ENSG00000111704

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2010-02-02 
Deposition Author(s): Sahu, S.C., Markley, J.L., Center for Eukaryotic Structural Genomics (CESG)

Revision History  

• Version 1.0: 2010-02-02
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2020-02-26
  Changes: Database references, Derived calculations, Other
• Version 1.3: 2023-06-14
  Changes: Database references, Other
• Version 1.4: 2024-05-08
  Changes: Data collection, Database references