2KFD | pdb_00002kfd

Prp40 FF4 domain

PDB DOI: https://doi.org/10.2210/pdb2KFD/pdb
BMRB: 16176

Classification: NUCLEAR PROTEIN
Organism(s): Saccharomyces cerevisiae
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2009-02-18 Released: 2009-09-08
Deposition Author(s): Bonet, R., Ruiz, L., Morales, B., Macias, M.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 80
Conformers Submitted: 15
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2KFD

This is version 1.3 of the entry. See complete history.

Literature

Solution structure of the fourth FF domain of yeast Prp40 splicing factor.

Bonet, R., Ruiz, L., Morales, B., Macias, M.J.

(2009) Proteins 77: 1000-1003

PubMed: 19722265 Search on PubMed
DOI: https://doi.org/10.1002/prot.22547
Primary Citation Related Structures:
2KFD

Organizational Affiliation

The Institute for Research in Biomedicine Barcelona (Protein NMR Group), Barcelona Science Park, Baldiri Reixac10-13, E-08028 Barcelona, Spain.

Macromolecule Content

Total Structure Weight: 8.22 kDa
Atom Count: 559
Modeled Residue Count: 65
Deposited Residue Count: 69
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Pre-mRNA-processing protein PRP40	A	69	Saccharomyces cerevisiae	Mutation(s): 0 Gene Names: PRP40, YKL012W, YKL165
UniProt
Find proteins for P33203 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P33203 Go to UniProtKB: P33203
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P33203
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 80
Conformers Submitted: 15
Selection Criteria: structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2009-09-08

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2009-09-08
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2020-02-19
Changes: Database references, Derived calculations, Other
Version 1.3: 2024-05-01
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.