2K5J | pdb_00002k5j

Solution structure of protein yiiF from Shigella flexneri serotype 5b (strain 8401) . Northeast Structural Genomics Consortium target sft1

PDB DOI: https://doi.org/10.2210/pdb2K5J/pdb
BMRB: 15839

Classification: structural genomics, unknown function
Organism(s): Shigella flexneri 5 str. 8401
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2008-06-28 Released: 2008-08-26
Deposition Author(s): Wu, Y., Singarapu, K., Semesi, A., Yee, A., Bansal, S., Prestegard, J., Arrowsmith, C., Szyperski, T., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2K5J

This is version 1.4 of the entry. See complete history.

Literature

Solution structure of protein yiiF from Shigella flexneri serotype 5b (strain 8401) . Northeast Structural Genomics Consortium target sft1

Wu, Y., Singarapu, K., Semesi, A., Yee, A., Bansal, S., Prestegard, J., Arrowsmith, C., Szyperski, T.

To be published.

Macromolecule Content

Total Structure Weight: 18.51 kDa
Atom Count: 1,296
Modeled Residue Count: 160
Deposited Residue Count: 160
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
uncharacterized protein yiiF	A, B	80	Shigella flexneri 5 str. 8401	Mutation(s): 0 Gene Names: yiiF, SFV_3605
UniProt
Find proteins for Q0SZ80 (Shigella flexneri serotype 5b (strain 8401)) Explore Q0SZ80 Go to UniProtKB: Q0SZ80
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q0SZ80
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2008-08-26

Deposition Author(s):

Montelione, G.T.

Northeast Structural Genomics Consortium (NESG)

Revision History (Full details and data files)

Version 1.0: 2008-08-26
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2020-02-19
Changes: Derived calculations, Other
Version 1.3: 2023-06-14
Changes: Database references, Other
Version 1.4: 2024-05-08
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.