2ED1

Solution structure of the SH3 domain of 130 kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1 GTPase-activating protein

• PDB DOI: https://doi.org/10.2210/pdb2ED1/pdb
• BMRB: 11153

• Classification: SIGNALING PROTEIN
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2007-02-14 Released: 2008-02-26 
• Deposition Author(s): Abe, H., Tochio, N., Miyamoto, K., Saito, K., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, target function 

Literature

Solution structure of the SH3 domain of 130 kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1 GTPase-activating protein

Abe, H., Tochio, N., Miyamoto, K., Saito, K., Kigawa, T., Yokoyama, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 8.3 kDa 
• Atom Count: 584 
• Modelled Residue Count: 76 
• Deposited Residue Count: 76 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
130 kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1 GTPase-activating protein	A	76	Homo sapiens	Mutation(s): 0  Gene Names: DDEF1
UniProt & NIH Common Fund Data Resources
Find proteins for Q9ULH1 (Homo sapiens) Explore Q9ULH1  Go to UniProtKB:  Q9ULH1
PHAROS:  Q9ULH1 GTEx:  ENSG00000153317

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2008-02-26 
Deposition Author(s): Abe, H., Tochio, N., Miyamoto, K., Saito, K., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2008-02-26
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2022-03-09
  Changes: Data collection, Database references, Derived calculations
• Version 1.3: 2024-05-29
  Changes: Data collection