2DO6

Solution structure of RSGI RUH-065, a UBA domain from human cDNA

• PDB DOI: https://doi.org/10.2210/pdb2DO6/pdb

• Classification: LIGASE
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2006-04-27 Released: 2007-05-08 
• Deposition Author(s): Hamada, T., Hirota, H., Lin, Y.-J., Guntert, P., Sato, M., Koshiba, S., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function, structures with the lowest energy, structures with the least restraint violations 

Literature

Solution structure of RSGI RUH-065, a UBA domain from human cDNA

Hamada, T., Lin, Y.-J., Sato, M., Koshiba, S., Inoue, M., Kigawa, T., Hayashi, F., Muto, Y., Yoshida, M., Akasaka, R., Kukimoto, M., Terada, T., Shirouzu, M., Tanaka, A., Guntert, P., Yokoyama, S., Hirota, H.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 11.04 kDa 
• Atom Count: 772 
• Modelled Residue Count: 106 
• Deposited Residue Count: 106 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
E3 ubiquitin-protein ligase CBL-B	A, B	53	Homo sapiens	Mutation(s): 0  Gene Names: CBLB, RNF56 EC: 6.3.2 (PDB Primary Data), 2.3.2.27 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for Q13191 (Homo sapiens) Explore Q13191  Go to UniProtKB:  Q13191
PHAROS:  Q13191 GTEx:  ENSG00000114423

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function, structures with the lowest energy, structures with the least restraint violations 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-05-08 
Deposition Author(s): Hamada, T., Hirota, H., Lin, Y.-J., Guntert, P., Sato, M., Koshiba, S., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2007-05-08
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-03-09
  Changes: Data collection, Database references, Derived calculations
• Version 1.4: 2024-05-29
  Changes: Data collection