2DK9 | pdb_00002dk9

Solution structure of Calponin Homology domain of Human MICAL-1

• PDB DOI: https://doi.org/10.2210/pdb2DK9/pdb
• BMRB: 7058

• Classification: SIGNALING PROTEIN
• Organism(s): Homo sapiens
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2006-04-07 Released: 2006-09-19 
• Deposition Author(s): Sun, H., Dai, H., Zhang, J., Xiong, S., Wu, J., Shi, Y.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

Solution structure of calponin homology domain of Human MICAL-1

Sun, H., Dai, H., Zhang, J., Jin, X., Xiong, S., Xu, J., Wu, J., Shi, Y.

(2006) J Biomol NMR 36: 295-300

• PubMed: 17043746 
• DOI: https://doi.org/10.1007/s10858-006-9062-5
• Primary Citation Related Structures: 
  2DK9

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Organizational Affiliation: 
• Hefei National Laboratory for Physical Sciences at Microscale and School of Life Science, University of Science and Technology of China, Hefei, Anhui, 230026, People's Republic of China.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 12.58 kDa 
• Atom Count: 885 
• Modeled Residue Count: 118 
• Deposited Residue Count: 118 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
NEDD9-interacting protein with calponin homology and LIM domains	A	118	Homo sapiens	Mutation(s): 0  Gene Names: MICAL1, MICAL, NICAL EC: 1.6.3.1 (UniProt), 1.14.13.225 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for Q8TDZ2 (Homo sapiens) Explore Q8TDZ2  Go to UniProtKB:  Q8TDZ2
PHAROS:  Q8TDZ2 GTEx:  ENSG00000135596

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2006-09-19 
Deposition Author(s): Sun, H., Dai, H., Zhang, J., Xiong, S., Wu, J., Shi, Y.

Revision History  

• Version 1.0: 2006-09-19
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-03-09
  Changes: Data collection, Database references, Derived calculations
• Version 1.4: 2024-05-29
  Changes: Data collection