Crystal structure of YJJV, TATD homolog from Escherichia coli K12, at 1.8 A resolution
Malashkevich, V.N., Xiang, D.F., Raushel, F.M., Almo, S.C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
putative deoxyribonuclease yjjV | 259 | Escherichia coli | Mutation(s): 0  EC: 3.1.21 | ![]() | |
UniProt | |||||
Find proteins for P39408 (Escherichia coli (strain K12)) Explore P39408  Go to UniProtKB:  P39408 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P39408 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
P33 Query on P33 | F [auth A] | 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL C14 H30 O8 XPJRQAIZZQMSCM-UHFFFAOYSA-N | |||
ZN Query on ZN | B [auth A], C [auth A], D [auth A], E [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 47.186 | α = 90 |
b = 45.007 | β = 100.75 |
c = 57.824 | γ = 90 |
Software Name | Purpose |
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CNS | refinement |
MAR345 | data collection |
SCALEPACK | data scaling |
PHASER | phasing |