1ZTN | pdb_00001ztn

INACTIVATION GATE OF POTASSIUM CHANNEL RAW3, NMR, 8 STRUCTURES


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 105 
  • Conformers Submitted: 
  • Selection Criteria: TO BE GIVEN 

wwPDB Validation 3D Report Full Report

Validation slider image for 1ZTN

This is version 1.4 of the entry. See complete history

Literature

NMR structure of inactivation gates from mammalian voltage-dependent potassium channels.

Antz, C.Geyer, M.Fakler, B.Schott, M.K.Guy, H.R.Frank, R.Ruppersberg, J.P.Kalbitzer, H.R.

(1997) Nature 385: 272-275

  • DOI: https://doi.org/10.1038/385272a0
  • Primary Citation Related Structures: 
    1ZTN, 1ZTO

  • PubMed Abstract: 

    The electrical signalling properties of neurons originate largely from the gating properties of their ion channels. N-type inactivation of voltage-gated potassium (Kv) channels is the best-understood gating transition in ion channels, and occurs by a 'ball-and-chain' type mechanism. In this mechanism an N-terminal domain (inactivation gate), which is tethered to the cytoplasmic side of the channel protein by a protease-cleavable chain, binds to its receptor at the inner vestibule of the channel, thereby physically blocking the pore. Even when synthesized as a peptide, ball domains restore inactivation in Kv channels whose inactivation domains have been deleted. Using high-resolution nuclear magnetic resonance (NMR) spectroscopy, we analysed the three-dimensional structure of the ball peptides from two rapidly inactivating mammalian K. channels (Raw3 (Kv3.4) and RCK4 (Kv1.4)). The inactivation peptide of Raw3 (Raw3-IP) has a compact structure that exposes two phosphorylation sites and allows the formation of an intramolecular disulphide bridge between two spatially close cysteine residues. Raw3-IP exhibits a characteristic surface charge pattern with a positively charged, a hydrophobic, and a negatively charged region. The RCK4 inactivation peptide (RCK4-IP) shows a similar spatial distribution of charged and uncharged regions, but is more flexible and less ordered in its amino-terminal part.


  • Organizational Affiliation
    • Institute of Physiology, University of Tubingen, Germany.

Macromolecule Content 

  • Total Structure Weight: 3.28 kDa 
  • Atom Count: 225 
  • Modeled Residue Count: 30 
  • Deposited Residue Count: 30 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Potassium voltage-gated channel subfamily C member 430Homo sapiensMutation(s): 0 
Gene Names: KCNC4
UniProt & NIH Common Fund Data Resources
Find proteins for Q03721 (Homo sapiens)
Explore Q03721 
Go to UniProtKB:  Q03721
PHAROS:  Q03721
GTEx:  ENSG00000116396 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ03721
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 105 
  • Conformers Submitted: 
  • Selection Criteria: TO BE GIVEN 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1997-06-05
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2016-02-10
    Changes: Database references
  • Version 1.4: 2024-05-01
    Changes: Data collection, Database references, Other