1YX7 | pdb_00001yx7

NMR structure of Calsensin, energy minimized average structure.


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Submitted: 

wwPDB Validation 3D Report Full Report

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This is version 1.4 of the entry. See complete history

Literature

Solution structure and backbone dynamics of Calsensin, an invertebrate neuronal calcium-binding protein.

Venkitaramani, D.V.Fulton, D.B.Andreotti, A.H.Johansen, K.M.Johansen, J.

(2005) Protein Sci 14: 1894-1901

  • DOI: https://doi.org/10.1110/ps.051412605
  • Primary Citation Related Structures: 
    1YX7, 1YX8

  • PubMed Abstract: 

    Calsensin is an EF-hand calcium-binding protein expressed by a subset of peripheral sensory neurons that fasciculate into a single tract in the leech central nervous system. Calsensin is a 9-kD protein with two EF-hand calcium-binding motifs. Using multidimensional NMR spectroscopy we have determined the solution structure and backbone dynamics of calcium-bound Calsensin. Calsensin consists of four helices forming a unicornate-type four-helix bundle. The residues in the third helix undergo slow conformational exchange indicating that the motion of this helix is associated with calciumbinding. The backbone dynamics of the protein as measured by (15)N relaxation rates and heteronuclear NOEs correlate well with the three-dimensional structure. Furthermore, comparison of the structure of Calsensin with other members of the EF-hand calcium-binding protein family provides insight into plausible mechanisms of calcium and target protein binding.


  • Organizational Affiliation
    • Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, Ames, IA 50011, USA.

Macromolecule Content 

  • Total Structure Weight: 9.12 kDa 
  • Atom Count: 635 
  • Modeled Residue Count: 83 
  • Deposited Residue Count: 83 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Calsensin83Haemopis marmorataMutation(s): 0 
UniProt
Find proteins for Q25088 (Haemopis marmorata)
Explore Q25088 
Go to UniProtKB:  Q25088
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ25088
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Submitted: 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2005-04-01
    Type: Initial release
  • Version 1.1: 2008-04-30
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2022-03-02
    Changes: Data collection, Database references, Derived calculations
  • Version 1.4: 2024-05-22
    Changes: Data collection