1YO6 | pdb_00001yo6

Crystal Structure of the putative Carbonyl Reductase Sniffer of Caenorhabditis elegans

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.60 Å
  • R-Value Free: 
    0.286 (Depositor), 0.285 (DCC) 
  • R-Value Work: 
    0.218 (Depositor), 0.218 (DCC) 
  • R-Value Observed: 
    0.218 (Depositor) 

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.3 of the entry. See complete history. 

Literature

Crystal Structure of the putative Carbonyl Reductase Sniffer of Caenorhabditis elegans

Schormann, N., Lu, S., Symersky, J., Karpova, E., Zhang, Y., Luo, D., Zhou, Q., Huang, W., Luan, C.-H., Gray, R., Arabshahi, A., McKinstry, A., Qiu, S., Cao, Z., An, J., Li, S., Lin, G., Tsao, J., Johnson, D., Luo, M., Shang, Q., Chen, Y., Stinnett, M., Bunzel, R., Carson, M., Bray, T., DeLucas, L.

To be published.

Macromolecule Content 

  • Total Structure Weight: 160.38 kDa 
  • Atom Count: 10,878 
  • Modeled Residue Count: 1,413 
  • Deposited Residue Count: 1,500 
  • Unique protein chains: 1

Macromolecules

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|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Putative Carbonyl Reductase Sniffer
A, B, C, D, E
A, B, C, D, E, F
250Caenorhabditis elegansMutation(s): 0 
Gene Names: Sniffer
UniProt
Find proteins for P90780 (Caenorhabditis elegans)
Explore P90780 
Go to UniProtKB:  P90780
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP90780
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.60 Å
  • R-Value Free:  0.286 (Depositor), 0.285 (DCC) 
  • R-Value Work:  0.218 (Depositor), 0.218 (DCC) 
  • R-Value Observed: 0.218 (Depositor) 
Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 74.87α = 90
b = 86.32β = 90
c = 242.56γ = 90
Software Package:
Software NamePurpose
HKL-2000data collection
SCALEPACKdata scaling
MOLREPphasing
CNSrefinement
HKL-2000data reduction

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2005-02-15
    Type: Initial release
  • Version 1.1: 2008-04-30
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2023-08-23
    Changes: Data collection, Database references, Refinement description