1XYU | pdb_00001xyu

Solution structure of the sheep prion protein with polymorphism H168


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

wwPDB Validation 3D Report Full Report

Validation slider image for 1XYU

This is version 1.4 of the entry. See complete history

Literature

Prion protein NMR structures of cats, dogs, pigs, and sheep

Lysek, D.A.Schorn, C.Nivon, L.G.Esteve-Moya, V.Christen, B.Calzolai, L.von Schroetter, C.Fiorito, F.Herrmann, T.Guntert, P.Wuthrich, K.

(2005) Proc Natl Acad Sci U S A 102: 640-645

  • DOI: https://doi.org/10.1073/pnas.0408937102
  • Primary Citation Related Structures: 
    1XYJ, 1XYK, 1XYQ, 1XYU, 1Y2S

  • PubMed Abstract: 

    The NMR structures of the recombinant cellular form of the prion proteins (PrPC) of the cat (Felis catus), dog (Canis familiaris), and pig (Sus scrofa), and of two polymorphic forms of the prion protein from sheep (Ovis aries) are presented. In all of these species, PrPC consists of an N-terminal flexibly extended tail with approximately 100 amino acid residues and a C-terminal globular domain of approximately 100 residues with three alpha-helices and a short antiparallel beta-sheet. Although this global architecture coincides with the previously reported murine, Syrian hamster, bovine, and human PrPC structures, there are local differences between the globular domains of the different species. Because the five newly determined PrPC structures originate from species with widely different transmissible spongiform encephalopathy records, the present data indicate previously uncharacterized possible correlations between local features in PrPC three-dimensional structures and susceptibility of different mammalian species to transmissible spongiform encephalopathies.


  • Organizational Affiliation
    • Institut für Molekularbiologie und Biophysik, Eidgenössische Technische Hochschule-Zürich, CH-8093 Zürich, Switzerland.

Macromolecule Content 

  • Total Structure Weight: 13.1 kDa 
  • Atom Count: 918 
  • Modeled Residue Count: 111 
  • Deposited Residue Count: 111 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Major prion protein111Ovis ariesMutation(s): 0 
Gene Names: Prnp
UniProt
Find proteins for P23907 (Ovis aries)
Explore P23907 
Go to UniProtKB:  P23907
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP23907
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2005-01-04
    Type: Initial release
  • Version 1.1: 2008-04-30
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2022-03-02
    Changes: Data collection, Database references, Derived calculations
  • Version 1.4: 2024-10-30
    Changes: Data collection, Structure summary