1XHS | pdb_00001xhs

Solution NMR Structure of Protein ytfP from Escherichia coli. Northeast Structural Genomics Consortium Target ER111.

PDB DOI: https://doi.org/10.2210/pdb1XHS/pdb
BMRB: 6448

Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Organism(s): Escherichia coli
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2004-09-20 Released: 2005-01-04
Deposition Author(s): Aramini, J.M., Huang, Y.J., Swapna, G.V.T., Paranji, R.K., Xiao, R., Shastry, R., Acton, T.B., Cort, J.R., Kennedy, M.A., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 56
Conformers Submitted: 10
Selection Criteria: LOWEST ENERGY

wwPDB Validation 3D Report Full Report

Validation slider image for 1XHS

This is version 1.4 of the entry. See complete history.

Literature

Solution NMR structure of Escherichia coli ytfP expands the structural coverage of the UPF0131 protein domain family.

Aramini, J.M., Huang, Y.J., Swapna, G.V., Cort, J.R., Rajan, P.K., Xiao, R., Shastry, R., Acton, T.B., Liu, J., Rost, B., Kennedy, M.A., Montelione, G.T.

(2007) Proteins 68: 789-795

PubMed: 17523190 Search on PubMed
DOI: https://doi.org/10.1002/prot.21450
Primary Citation Related Structures:
1XHS

Organizational Affiliation

Center for Advanced Biotechnology and Medicine, Department of Molecular Biology and Biochemistry, Rutgers University, Piscataway, New Jersey 08854, USA. jma@cabm.rutgers.edu

Macromolecule Content

Total Structure Weight: 13.95 kDa
Atom Count: 909
Modeled Residue Count: 113
Deposited Residue Count: 121
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Hypothetical UPF0131 protein ytfP	A	121	Escherichia coli	Mutation(s): 0 Gene Names: ytfP
UniProt
Find proteins for P0AE48 (Escherichia coli (strain K12)) Explore P0AE48 Go to UniProtKB: P0AE48
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0AE48
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 56
Conformers Submitted: 10
Selection Criteria: LOWEST ENERGY

Structure Validation

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Entry History

Deposition Data

Released Date: 2005-01-04

Deposition Author(s):

Montelione, G.T.

Northeast Structural Genomics Consortium (NESG)

Revision History (Full details and data files)

Version 1.0: 2005-01-04
Type: Initial release
Version 1.1: 2007-10-23
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-03-02
Changes: Data collection, Database references, Derived calculations, Refinement description
Version 1.4: 2024-05-22
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.