1X57

Solution structures of the HTH domain of human EDF-1 protein

• PDB DOI: https://doi.org/10.2210/pdb1X57/pdb

• Classification: DNA BINDING PROTEIN
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2005-05-15 Released: 2005-11-15 
• Deposition Author(s): Nameki, N., Sato, M., Tochio, N., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function,structures with the lowest energy,structures with the least restraint violations 

Literature

Solution structures of the HTH domain of human EDF-1 protein

Nameki, N., Sato, M., Tochio, N., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 9.57 kDa 
• Atom Count: 670 
• Modelled Residue Count: 91 
• Deposited Residue Count: 91 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Endothelial differentiation-related factor 1	A	91	Homo sapiens	Mutation(s): 0  Gene Names: EDF-1
UniProt & NIH Common Fund Data Resources
Find proteins for O60869 (Homo sapiens) Explore O60869  Go to UniProtKB:  O60869
PHAROS:  O60869 GTEx:  ENSG00000107223

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function,structures with the lowest energy,structures with the least restraint violations 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2005-11-15 
Deposition Author(s): Nameki, N., Sato, M., Tochio, N., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2005-11-15
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-03-02
  Changes: Data collection, Database references, Derived calculations
• Version 1.4: 2024-05-29
  Changes: Data collection