1UFB | pdb_00001ufb

Crystal structure of TT1696 from Thermus thermophilus HB8

PDB DOI: https://doi.org/10.2210/pdb1UFB/pdb

Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Organism(s): Thermus thermophilus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2003-05-28 Released: 2003-11-28
Deposition Author(s): Idaka, M., Murayama, K., Yamaguchi, H., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free:
0.228 (Depositor)
R-Value Work:
0.187 (Depositor)

wwPDB Validation 3D Report Full Report

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This is version 1.3 of the entry. See complete history.

Literature

Crystal structure of TT1696 from Thermus thermophilus HB8

Idaka, M., Murayama, K., Yamaguchi, H., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 56.51 kDa
Atom Count: 4,272
Modeled Residue Count: 508
Deposited Residue Count: 508
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
TT1696 protein	A, B, C, D	127	Thermus thermophilus	Mutation(s): 0
UniProt
Find proteins for P83963 (Thermus thermophilus) Explore P83963 Go to UniProtKB: P83963
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P83963
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free: 0.228 (Depositor)
R-Value Work: 0.187 (Depositor)

Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 80.08	α = 90
b = 134.326	β = 90
c = 123.066	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
DENZO	data reduction
SCALEPACK	data scaling
SHARP	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2003-11-28

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2003-11-28
Type: Initial release
Version 1.1: 2008-04-27
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2023-12-27
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.