1RLJ

Structural Genomics, a Flavoprotein NrdI from Bacillus subtilis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.192 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.3 of the entry. See complete history


Literature

1.5A crystal structure of a thioredoxin-like protein NrdI from Bacillus subtilis

Wu, R.Zhang, R.Collart, F.Joachimiak, A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
NrdI protein139Bacillus subtilisMutation(s): 0 
Gene Names: NRDIBSU17370
UniProt
Find proteins for P50618 (Bacillus subtilis (strain 168))
Explore P50618 
Go to UniProtKB:  P50618
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP50618
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.192 
  • Space Group: P 62
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 85.236α = 90
b = 85.236β = 90
c = 59.992γ = 120
Software Package:
Software NamePurpose
CNSrefinement
SBC-Collectdata collection
HKL-2000data scaling
CNSphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2004-07-13
    Type: Initial release
  • Version 1.1: 2008-04-29
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2024-02-14
    Changes: Data collection, Database references, Derived calculations