1RFH | pdb_00001rfh

Solution structure of the C1 domain of Nore1, a novel Ras effector

PDB DOI: https://doi.org/10.2210/pdb1RFH/pdb
BMRB: 6059

Classification: METAL BINDING PROTEIN
Organism(s): Mus musculus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2003-11-09 Released: 2005-06-14
Deposition Author(s): Guiberman, E., Wohlgemuth, S., Herrmann, C., Harjes, S., Mueller, K.H., Bayer, P.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 21
Selection Criteria: structures with the least restraint violations,structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 1RFH

This is version 1.4 of the entry. See complete history.

Literature

The solution structure of C1 domain of Nore1

Guiberman, E., Wohlgemuth, S., Herrmann, C., Harjes, S., Mueller, K.H., Bayer, P.

To be published.

Macromolecule Content

Total Structure Weight: 6.83 kDa
Atom Count: 466
Modeled Residue Count: 59
Deposited Residue Count: 59
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Ras association (RalGDS/AF-6) domain family 5	A	59	Mus musculus	Mutation(s): 0 Gene Names: RASSF5
UniProt
Find proteins for Q5EBH1 (Mus musculus) Explore Q5EBH1 Go to UniProtKB: Q5EBH1
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q5EBH1
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain C [auth A] SDF format, chain B [auth A] MOL2 format, chain C [auth A] MOL2 format, chain B [auth A] mmCIF format, chain C [auth A] mmCIF format, chain B [auth A]	B [auth A], C [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain B [auth A] Focus chain C [auth A]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 21
Selection Criteria: structures with the least restraint violations,structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2005-06-14

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2005-06-14
Type: Initial release
Version 1.1: 2008-04-29
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-03-02
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2024-05-22
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.