1R9H

Structural Genomics of C.elegans: FKBP-type Peptidylprolyl Isomerase

PDB DOI: https://doi.org/10.2210/pdb1R9H/pdb

Classification: ISOMERASE
Organism(s): Caenorhabditis elegans
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2003-10-29 Released: 2003-12-02
Deposition Author(s): Li, S., Southeast Collaboratory for Structural Genomics (SECSG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.80 Å
R-Value Free: 0.227
R-Value Work: 0.210
R-Value Observed: 0.210

wwPDB Validation 3D Report Full Report

This is version 1.4 of the entry. See complete history.

Literature

Structural Genomics of C.elegans: FKBP-type Peptidylprolyl Isomerase

Li, S., Finley, J., Luan, C.-H., Qiu, S., Gray, R., Shang, Q., Luo, D., Hongli, C., Zhao, J., Huang, W.-Y., DeLucas, L.J., Nagy, L., Stanton, A., Luo, M., Symersky, J., Schormann, N., Lin, G., Tsao, J., Johnson, D.H., Carson, W.M.

To be published.

Macromolecule Content

Total Structure Weight: 14.59 kDa
Atom Count: 1,006
Modelled Residue Count: 118
Deposited Residue Count: 135
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
FK506 Binding protein family	A	135	Caenorhabditis elegans	Mutation(s): 0 Gene Names: f31d4.3 EC: 5.2.1.8
UniProt
Find proteins for O45418 (Caenorhabditis elegans) Explore O45418 Go to UniProtKB: O45418
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O45418
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.80 Å
R-Value Free: 0.227
R-Value Work: 0.210
R-Value Observed: 0.210
Space Group: P 6₁ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 52.417	α = 90
b = 52.417	β = 90
c = 210.8	γ = 120

Software Package:

Software Name	Purpose
CNS	refinement

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2003-12-02

Deposition Author(s):

Southeast Collaboratory for Structural Genomics (SECSG)

Revision History (Full details and data files)

Version 1.0: 2003-12-02
Type: Initial release
Version 1.1: 2008-04-29
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2018-01-24
Changes: Structure summary
Version 1.4: 2024-02-14
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.