1NZN | pdb_00001nzn

Cytosolic domain of the human mitchondrial fission protein Fis1 adopts a TPR fold

PDB DOI: https://doi.org/10.2210/pdb1NZN/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): Yes
Membrane Protein: Yes OPM

Deposited: 2003-02-18 Released: 2004-03-02
Deposition Author(s): Gittis, A.G., Dohm, J.A., Hill, R.B.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free:
0.255 (Depositor)
R-Value Work:
0.230 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 1NZN

This is version 1.4 of the entry. See complete history.

Literature

Cytosolic domain of the human mitchondrial fission protein Fis1 adopts a TPR fold

Dohm, J.A., Lee, S.J., Hardwick, J.M., Hill, R.B., Gittis, A.G.

(2004) Proteins 54: 153-156

PubMed: 14705031 Search on PubMed Search on PubMed Central
DOI: https://doi.org/10.1002/prot.10524
Primary Citation Related Structures:
1NZN

Organizational Affiliation

Department of Biology, Johns Hopkins University, Baltimore, Maryland 21218, USA.

Macromolecule Content

Total Structure Weight: 14.96 kDa
Atom Count: 1,078
Modeled Residue Count: 122
Deposited Residue Count: 126
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Fission protein Fis1p	A	126	Homo sapiens	Mutation(s): 2 Membrane Entity: Yes
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y3D6 (Homo sapiens) Explore Q9Y3D6 Go to UniProtKB: Q9Y3D6
PHAROS: Q9Y3D6 GTEx: ENSG00000214253
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9Y3D6
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
SO4 Query on SO4 Download:Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Interactions Focus chain B [auth A]
GOL Query on GOL Download:Ideal Coordinates CCD File SDF format, chain C [auth A] MOL2 format, chain C [auth A] mmCIF format, chain C [auth A]	C [auth A]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain C [auth A]

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.255 (Depositor)
R-Value Work: 0.230 (Depositor)

Space Group: P 6₅ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 48.985	α = 90
b = 48.985	β = 90
c = 169.199	γ = 120

Software Package:

Software Name	Purpose
HKL-2000	data collection
SCALEPACK	data scaling
SOLVE	phasing
RESOLVE	model building
CNS	refinement
HKL-2000	data reduction
RESOLVE	phasing

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2004-03-02

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2004-03-02
Type: Initial release
Version 1.1: 2008-04-29
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance
Version 1.3: 2011-11-16
Changes: Atomic model
Version 1.4: 2024-11-20
Changes: Data collection, Database references, Derived calculations, Structure summary

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.