1NIQ | pdb_00001niq

Solution Structure of the HOO-Bm bound BLMT, Transposon Tn5-encoding Bleomycin-binding Protein

PDB DOI: https://doi.org/10.2210/pdb1NIQ/pdb

Classification: PROTEIN BINDING
Organism(s): Klebsiella pneumoniae
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2002-12-25 Released: 2003-12-25
Deposition Author(s): Sugiyama, M.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 20
Conformers Submitted: 1
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 1NIQ

This is version 1.4 of the entry. See complete history.

Literature

Solution Structure of the HOO-Bm bound BLMT, Transposon Tn5-encoding Bleomycin-binding Protein

Sugiyama, M.

To be published.

Macromolecule Content

Total Structure Weight: 31.13 kDa
Atom Count: 2,140
Modeled Residue Count: 250
Deposited Residue Count: 252
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Bleomycin Resistance Protein	A [auth B], B [auth C]	126	Klebsiella pneumoniae	Mutation(s): 0
UniProt
Find proteins for P13081 (Klebsiella pneumoniae) Explore P13081 Go to UniProtKB: P13081
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P13081
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
BLM Query on BLM Download:Ideal Coordinates CCD File SDF format, chain F [auth B] SDF format, chain E [auth B] MOL2 format, chain F [auth B] MOL2 format, chain E [auth B] mmCIF format, chain F [auth B] mmCIF format, chain E [auth B]	E [auth B], F [auth B]	BLEOMYCIN A2 C₅₅ H₈₅ N₁₇ O₂₁ S₃ ZGCQRJQBETWECF-UAPAGMARSA-N		Interactions Focus chain E [auth B] Focus chain F [auth B]
CU Query on CU Download:Ideal Coordinates CCD File SDF format, chain D [auth B] SDF format, chain C [auth B] MOL2 format, chain D [auth B] MOL2 format, chain C [auth B] mmCIF format, chain D [auth B] mmCIF format, chain C [auth B]	C [auth B], D [auth B]	COPPER (II) ION Cu JPVYNHNXODAKFH-UHFFFAOYSA-N		Interactions Focus chain C [auth B] Focus chain D [auth B]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 20
Conformers Submitted: 1
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2003-12-25

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2003-12-25
Type: Initial release
Version 1.1: 2008-04-29
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-02-23
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2024-12-25
Changes: Advisory, Data collection, Derived calculations, Structure summary

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.