1MG8 | pdb_00001mg8

NMR structure of ubiquitin-like domain in murine Parkin

• PDB DOI: https://doi.org/10.2210/pdb1MG8/pdb
• BMRB: 5496

• Classification: APOPTOSIS
• Organism(s): Mus musculus
• Mutation(s): No 


• Deposited: 2002-08-15 Released: 2003-04-08 
• Deposition Author(s): Tashiro, M., Okubo, S., Shimotakahara, S., Hatanaka, H., Yasuda, H., Kainosho, M., Yokoyama, S., Shindo, H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 50 
• Conformers Submitted: 10 
• Selection Criteria: structures with the lowest energy 

Literature

NMR structure of ubiquitin-like domain in PARKIN: Gene product of familial Parkinson's disease.

Tashiro, M., Okubo, S., Shimotakahara, S., Hatanaka, H., Yasuda, H., Kainosho, M., Yokoyama, S., Shindo, H.

(2003) J Biomol NMR 25: 153-156

• PubMed: 12652124 
• DOI: https://doi.org/10.1023/a:1022254432039
• Primary Citation Related Structures: 
  1MG8

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Organizational Affiliation: 
• Department of Chemistry, Faculty of Science, Tokyo Metropolitan University, Minami-osawa, Hachioji, Tokyo 192-0367, Japan.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 8.92 kDa 
• Atom Count: 626 
• Modeled Residue Count: 78 
• Deposited Residue Count: 78 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Parkin	A	78	Mus musculus	Mutation(s): 0  EC: 2.3.2.31
UniProt
Find proteins for Q9WVS6 (Mus musculus) Explore Q9WVS6  Go to UniProtKB:  Q9WVS6

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 50 
• Conformers Submitted: 10 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2003-04-08 
Deposition Author(s): Tashiro, M., Okubo, S., Shimotakahara, S., Hatanaka, H., Yasuda, H., Kainosho, M., Yokoyama, S., Shindo, H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2003-04-08
  Type: Initial release
  
• Version 1.1: 2008-04-28
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-02-23
  Changes: Database references, Derived calculations
• Version 1.4: 2022-12-21
  Changes: Database references
• Version 1.5: 2024-05-29
  Changes: Data collection