1IL1

Crystal structure of G3-519, an anti-HIV monoclonal antibody

PDB DOI: https://doi.org/10.2210/pdb1IL1/pdb

Classification: IMMUNE SYSTEM
Organism(s): Mus musculus
Mutation(s): No

Deposited: 2001-05-07 Released: 2001-05-16
Deposition Author(s): Berry, M.B., Johnson, K.A., Radding, W., Fung, M., Liou, R., Phillips Jr., G.N.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free: 0.246
R-Value Work: 0.188
R-Value Observed: 0.187

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Structure of an anti-HIV monoclonal Fab antibody fragment specific to a gp120 C-4 region peptide.

Berry, M.B., Johnson, K.A., Radding, W., Fung, M., Liou, R., Phillips Jr., G.N.

(2001) Proteins 45: 281-282

PubMed: 11599031 Search on PubMed
DOI: https://doi.org/10.1002/prot.1148
Primary Citation of Related Structures:
1IL1

Organizational Affiliation

Department of Biochemistry and Cell Biology, Rice University, Houston, Texas, USA.

Macromolecule Content

Total Structure Weight: 48.07 kDa
Atom Count: 3,639
Modelled Residue Count: 438
Deposited Residue Count: 438
Unique protein chains: 2

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
monoclonal antibody G3-519 (heavy chain)	A	219	Mus musculus	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
monoclonal antibody G3-519 (light chain)	B	219	Mus musculus	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free: 0.246
R-Value Work: 0.188
R-Value Observed: 0.187
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 37.2	α = 90
b = 84.3	β = 90
c = 134	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
X-PLOR	model building
CNS	refinement
X-PLOR	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2001-05-16

Deposition Author(s):

Phillips Jr., G.N.

Revision History (Full details and data files)

Version 1.0: 2001-05-16
Type: Initial release
Version 1.1: 2008-04-27
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.