1AXJ

FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F), NMR, 20 STRUCTURES

• PDB DOI: https://doi.org/10.2210/pdb1AXJ/pdb

• Classification: BINDING PROTEIN
• Organism(s): Nitratidesulfovibrio vulgaris str. 'Miyazaki F
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 1997-10-16 Released: 1998-01-14 
• Deposition Author(s): Liepinsh, E., Otting, G.

---

Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 50 
• Conformers Submitted: 20 
• Selection Criteria: LEAST RESTRAINT VIOLATIONS 

Literature

Pathway of chymotrypsin evolution suggested by the structure of the FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)

Liepinsh, E., Kitamura, M., Murakami, T., Nakaya, T., Otting, G.

(1997) Nat Struct Biol 4: 975-979

• PubMed: 9406543 
• DOI: https://doi.org/10.1038/nsb1297-975
• Primary Citation of Related Structures:  
  1AXJ

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 13.61 kDa 
• Atom Count: 957 
• Modelled Residue Count: 122 
• Deposited Residue Count: 122 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
FMN-BINDING PROTEIN	A	122	Nitratidesulfovibrio vulgaris str. 'Miyazaki F	Mutation(s): 0
UniProt
Find proteins for Q46604 (Nitratidesulfovibrio vulgaris (strain DSM 19637 / Miyazaki F)) Explore Q46604  Go to UniProtKB:  Q46604

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
FMN	B [auth A]	FLAVIN MONONUCLEOTIDE C17 H21 N4 O9 P FVTCRASFADXXNN-SCRDCRAPSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 50 
• Conformers Submitted: 20 
• Selection Criteria: LEAST RESTRAINT VIOLATIONS 

Structure Validation

Entry History 

Deposition Data

• Released Date: 1998-01-14 
Deposition Author(s): Liepinsh, E., Otting, G.

Revision History  

• Version 1.0: 1998-01-14
  Type: Initial release
  
• Version 1.1: 2008-03-24
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-02-16
  Changes: Database references, Derived calculations, Other
• Version 1.4: 2024-05-22
  Changes: Data collection