1AH0

PIG ALDOSE REDUCTASE COMPLEXED WITH SORBINIL


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.192 

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Ligand Structure Quality Assessment 


This is version 1.3 of the entry. See complete history


Literature

A 'specificity' pocket inferred from the crystal structures of the complexes of aldose reductase with the pharmaceutically important inhibitors tolrestat and sorbinil.

Urzhumtsev, A.Tete-Favier, F.Mitschler, A.Barbanton, J.Barth, P.Urzhumtseva, L.Biellmann, J.F.Podjarny, A.Moras, D.

(1997) Structure 5: 601-612

  • DOI: https://doi.org/10.1016/s0969-2126(97)00216-5
  • Primary Citation of Related Structures:  
    1AH0, 1AH3, 1AH4

  • PubMed Abstract: 

    Aldose reductase (AR) is an NADPH-dependent enzyme implicated in long-term diabetic complications. Buried at the bottom of a deep hydrophobic cleft, the NADPH coenzyme is surrounded by the conserved hydrophilic residues of the AR active site. The existence of an anionic binding site near the NADP+ has been determined from the structures of the complexes of AR with citrate, cacodylate and glucose-6-phosphate. The inhibitor zopolrestat binds to this anionic site, and in the hydrophobic cleft, after a change of conformation which opens a 'specificity' pocket.


  • Organizational Affiliation

    UPR-de Biologie Structurale 9004 IGMBC CNRS/INSERM/ULP 1 rue Laurent Fries, B.P. 163, 67404, Illkirch, France.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
ALDOSE REDUCTASE316Sus scrofaMutation(s): 0 
EC: 1.1.1.21
UniProt
Find proteins for P80276 (Sus scrofa)
Explore P80276 
Go to UniProtKB:  P80276
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP80276
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
NAP
Query on NAP

Download Ideal Coordinates CCD File 
B [auth A]NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H28 N7 O17 P3
XJLXINKUBYWONI-NNYOXOHSSA-N
SBI
Query on SBI

Download Ideal Coordinates CCD File 
C [auth A]SORBINIL
C11 H9 F N2 O3
LXANPKRCLVQAOG-NSHDSACASA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.192 
  • Space Group: P 43 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 67.92α = 90
b = 67.92β = 90
c = 152.8γ = 90
Software Package:
Software NamePurpose
X-PLORmodel building
X-PLORrefinement
XDSdata reduction
MARSCALEdata scaling
X-PLORphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1998-04-15
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2024-01-31
    Changes: Data collection, Database references, Derived calculations, Other, Refinement description