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 11LV | pdb_000011lv

Structure of a tau(297-407)-4D filament grown in potassium citrate buffer for 42 days (polymorph 2)


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.0 of the entry. See complete history. 

Literature

Cofactor-Free Tau Filaments Are Dynamic and Undergo Structural Evolution Driven by Thermodynamic Control.

Powell, W.C., Yan, N., Tse, E., Melo, A.A., Vasquez, J.A., Southworth, D.R., Gestwicki, J.E.

(2026) J Am Chem Soc 148: 35386-35398

  • DOI: https://doi.org/10.1021/jacs.6c04928
  • Primary Citation Related Structures: 
    11LU, 11LV, 11LW

  • PubMed Abstract: 

    Tau filaments are a hallmark of neurodegenerative tauopathies, such as Alzheimer's disease (AD). Structural studies have revealed that patient-derived tau fibrils adopt distinct folds in different tauopathies; however, it is unclear what forces guide this process. To explore this question, we investigated the assembly of a tau fragment containing four disease-associated phospho-mimetics (termed Tau(297-407)-4D) in vitro. Under cofactor-free and quiescent conditions, Tau(297-407)-4D forms fibrils with a core structure that partially resembles the AD fold after about 7 days. Strikingly, we noticed that this filament behaves as a hydrogel and evolves into two new polymorphs as it ages over the next 35 days. Thus, tau fibrils formed under cofactor-free conditions are dynamic, exhibiting substantial nonequilibrium behavior. To probe what types of perturbations might stabilize these structures, we applied mechanical agitation, which drove the filaments toward thermodynamic equilibrium in a mechanism consistent with Ostwald ripening into solid-phase, micrometer-sized particles. Likewise, the addition of polyanionic cofactors to preformed Tau(297-407)-4D fibrils significantly stabilized them, as judged by solubility equilibria and chemical denaturation experiments. A subset of the polyanions also remodeled the fibril structure and tuned the extent of fibril-fibril interactions (i.e., "clumping"). We conclude that environmental factors, such as mechanical stress and/or polyanions, play an important role in promoting the thermodynamic stability of otherwise dynamic tau fibrils. We speculate that, in patients, such factors might contribute to the maturation of disease-specific conformers.


  • Organizational Affiliation: 
    • Institute for Neurodegenerative Diseases, University of California San Francisco, San Francisco, California94158, United States.

Macromolecule Content 

  • Total Structure Weight: 120.13 kDa 
  • Atom Count: 5,740 
  • Modeled Residue Count: 750 
  • Deposited Residue Count: 1,110 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Microtubule-associated protein tau
A, B, C, D, E
A, B, C, D, E, F, G, H, I, J
111Homo sapiensMutation(s): 4 
Gene Names: MAPT, MAPTL, MTBT1, TAU
UniProt & NIH Common Fund Data Resources
Find proteins for P10636 (Homo sapiens)
Explore P10636 
Go to UniProtKB:  P10636
GTEx:  ENSG00000186868 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP10636
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION5
MODEL REFINEMENTPHENIX
MODEL REFINEMENTISOLDE

Structure Validation

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Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Other privateUnited States--

Revision History  (Full details and data files)

  • Version 1.0: 2026-11-11
    Type: Initial release