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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: PubMed ID = 39240714

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Search Summary

This query matches 42 Structures.

Refinements

Structure Determination Methodology

experimental (42)

Scientific Name of Source Organism

	Rattus norvegicus (38)
	Homo sapiens (4)

Taxonomy

Eukaryota (42)

Experimental Method

	X-RAY DIFFRACTION (38)
	ELECTRON MICROSCOPY (4)

Polymer Entity Type

Protein (42)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (20)
	2.0 - 2.5 (11)
	2.5 - 3.0 (3)
	3.0 - 3.5 (2)
	> 4.5 (4)

Release Date

	2005 - 2009 (23)
	2010 - 2014 (4)
	2015 - 2019 (10)
	2020 - 2024 (5)

Membrane Protein Annotation

	PDBTM (2)
	MemProtMD (1)
	OPM (1)
	mpstruc (1)

Symmetry Type

	Cyclic (35)
	Asymmetric (9)

SCOP Classification

	Alpha and beta proteins (a/b) (37)
	Artifacts (6)

AllSelected

1 to 25 of 42 Structures

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1TXF \| pdb_00001txf	Download File View File

CRYSTAL STRUCTURE OF THE GLUR5 LIGAND BINDING CORE IN COMPLEX WITH GLUTAMATE AT 2.1 ANGSTROM RESOLUTION

Mayer, M.L.

(2005) Neuron 45: 539-552

Released	2005-02-08
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	GLU

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1VSO \| pdb_00001vso	Download File View File

Crystal Structure of the Ligand-Binding Core of iGluR5 in Complex With the Antagonist (S)-ATPO at 1.85 A resolution

Hald, H., Naur, P., Gajhede, M., Kastrup, J.S.

(2007) J Biological Chem 282: 25726-25736

Released	2007-07-03
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	AT1, GOL

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1YCJ \| pdb_00001ycj	Download File View File

Crystal structure of the kainate receptor GluR5 ligand-binding core in complex with (S)-glutamate

Naur, P., Vestergaard, B., Skov, L.K., Egebjerg, J., Gajhede, M., Kastrup, J.S.

(2005) FEBS Lett 579: 1154-1160

Released	2005-02-01
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Rattus norvegicus
Macromolecule	Ionotropic glutamate receptor 5 (protein)
Unique Ligands	GLU, SO4

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2F34 \| pdb_00002f34	Download File View File

Crystal Structure of the GluR5 Ligand Binding Core Dimer with UBP310 At 1.74 Angstroms Resolution

Mayer, M.L.

(2006) J Neurosci 26: 2852-2861

Released	2006-04-04
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 1 (protein)
Unique Ligands	1PE, CL, UBA

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2F35 \| pdb_00002f35	Download File View File

Crystal Structure of the GluR5 Ligand Binding Core with UBP302 At 1.87 Angstroms Resolution

Mayer, M.L.

(2006) J Neurosci 26: 2852-2861

Released	2006-04-04
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 1 (protein)
Unique Ligands	1PE, CL, UBC

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2F36 \| pdb_00002f36	Download File View File

Crystal Structure of the GluR5 Ligand Binding Core Dimer with Glutamate At 2.1 Angstroms Resolution

Mayer, M.L.

(2006) J Neurosci 26: 2852-2861

Released	2006-04-04
Method	X-RAY DIFFRACTION 2.11 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 1 (protein)
Unique Ligands	GLU, SO4

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2OJT \| pdb_00002ojt	Download File View File

Structure and mechanism of kainate receptor modulation by anions

Mayer, M.L.

(2007) Neuron 53: 829-841

Released	2007-04-03
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	1PE, BR, UBA

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2PBW \| pdb_00002pbw	Download File View File

Crystal Structure of the Ligand-Binding Core of iGluR5 in Complex with the Partial agonist Domoic Acid at 2.5 A Resolution

Hald, H., Naur, P., Gajhede, M., Kastrup, J.S.

(2007) J Biological Chem 282: 25726-25736

Released	2007-07-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	DOQ

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2QS1 \| pdb_00002qs1	Download File View File

Crystal structure of the GluR5 ligand binding core dimer in complex with UBP315 at 1.80 Angstroms resolution

Alushin, G.M., Jane, D.E., Mayer, M.L.

(2011) Neuropharmacology 60: 126-134

Released	2008-08-05
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	1PE, CL, UB1

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2QS2 \| pdb_00002qs2	Download File View File

Crystal structure of the GluR5 ligand binding core dimer in complex with UBP318 at 1.80 Angstroms resolution

Alushin, G.M., Jane, D.E., Mayer, M.L.

(2011) Neuropharmacology 60: 126-134

Released	2008-08-05
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	1PE, CL, UBF

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2QS3 \| pdb_00002qs3	Download File View File

Crystal structure of the GluR5 ligand binding core dimer in complex with UBP316 at 1.76 Angstroms resolution

Alushin, G.M., Jane, D.E., Mayer, M.L.

(2009) Neuropharmacology 56: 121-130

Released	2008-08-05
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	1PE, CL, UBE

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2QS4 \| pdb_00002qs4	Download File View File

Crystal structure of the GluR5 ligand binding core dimer in complex with LY466195 at 1.58 Angstroms resolution

Alushin, G.M., Jane, D.E., Mayer, M.L.

(2011) Neuropharmacology 60: 126-134

Released	2008-08-05
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	GOL, LY5, NH4

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2ZNS \| pdb_00002zns	Download File View File

Crystal structure of the ligand-binding core of the human ionotropic glutamate receptor, GluR5, in complex with glutamate

Unno, M., Sasaki, M., Ikeda-Saito, M.

(2011) J Mol Biology 413: 667-683

Released	2009-05-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	GLU

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2ZNT \| pdb_00002znt	Download File View File

Crystal structure of the ligand-binding core of the human ionotropic glutamate receptor, GluR5, in complex with a novel selective agonist, dysiherbaine

Unno, M., Sasaki, M., Ikeda-Saito, M.

(2011) J Mol Biology 413: 667-683

Released	2009-05-05
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	BME, DYH

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2ZNU \| pdb_00002znu	Download File View File

Crystal structure of the ligand-binding core of the human ionotropic glutamate receptor, GluR5, in complex with a novel selective agonist, neodysiherbaine A

Unno, M., Sasaki, M., Ikeda-Saito, M.

(2011) J Mol Biology 413: 667-683

Released	2009-05-05
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	BME, NDZ

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3C31 \| pdb_00003c31	Download File View File

Crystal structure of GluR5 ligand-binding core in complex with lithium at 1.49 Angstrom resolution

Mayer, M.L.

(2008) Neuron 58: 720-735

Released	2008-06-17
Method	X-RAY DIFFRACTION 1.49 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 1 (protein)
Unique Ligands	CL, GOL, KAI, LI, SO4

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3C32 \| pdb_00003c32	Download File View File

Crystal structure of GluR5 ligand-binding core in complex with sodium at 1.72 Angstrom resolution

Mayer, M.L.

(2008) Neuron 58: 720-735

Released	2008-06-17
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 1 (protein)
Unique Ligands	CL, GOL, KAI, NA

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3C33 \| pdb_00003c33	Download File View File

Crystal structure of GluR5 ligand-binding core in complex with potassium at 1.78 Angstrom resolution

Mayer, M.L.

(2008) Neuron 58: 720-735

Released	2008-06-17
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 1 (protein)
Unique Ligands	CL, GOL, K, KAI

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3C34 \| pdb_00003c34	Download File View File

Crystal structure of GluR5 ligand-binding core in complex with rubidium at 1.82 Angstrom resolution

Mayer, M.L.

(2008) Neuron 58: 720-735

Released	2008-06-17
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 1 (protein)
Unique Ligands	CL, GOL, KAI, RB

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3C35 \| pdb_00003c35	Download File View File

Crystal structure of GluR5 ligand-binding core in complex with cesium at 1.97 Angstrom resolution

Mayer, M.L.

(2008) Neuron 58: 720-735

Released	2008-06-17
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 1 (protein)
Unique Ligands	CL, CS, GOL, KAI

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3C36 \| pdb_00003c36	Download File View File

Crystal structure of GluR5 ligand-binding core in complex with ammonium ions at 1.68 Angstrom resolution

Mayer, M.L.

(2008) Neuron 58: 720-735

Released	2008-06-17
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	Rattus norvegicus
Macromolecule	GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 1 (protein)
Unique Ligands	CL, GOL, KAI, NH4

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3GBA \| pdb_00003gba	Download File View File

X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with dysiherbaine at 1.35A resolution

Frydenvang, K., Naur, P., Gajhede, M., Kastrup, J.S.

(2009) J Biological Chem 284: 14219-14229

Released	2009-03-17
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	CL, DYH, GOL, SO4

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3GBB \| pdb_00003gbb	Download File View File

X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with MSVIII-19 at 2.10A resolution

Frydenvang, K., Naur, P., Gajhede, M., Kastrup, J.S.

(2009) J Biological Chem 284: 14219-14229

Released	2009-03-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	MS8

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3S2V \| pdb_00003s2v	Download File View File

Crystal Structure of the Ligand Binding Domain of GluK1 in Complex with an Antagonist (S)-1-(2'-Amino-2'-carboxyethyl)-3-[(2-carboxythien-3-yl)methyl]thieno[3,4-d]pyrimidin-2,4-dione at 2.5 A Resolution

Venskutonyte, R., Frydenvang, K., Kastrup, J.S.

(2011) J Med Chem 54: 4793-4805

Released	2011-06-22
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	3HU, CL, GOL, SO4

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4DLD \| pdb_00004dld	Download File View File

Crystal structure of the GluK1 ligand-binding domain (S1S2) in complex with the antagonist (S)-2-amino-3-(2-(2-carboxyethyl)-5-chloro-4-nitrophenyl)propionic acid at 2.0 A resolution

Venskutonyte, R., Frydenvang, K., Kastrup, J.S.

(2012) ChemMedChem 7: 1793-1798

Released	2012-10-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 1 (protein)
Unique Ligands	CL, GOL, SO4, TZG

1 to 25 of 42 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1TXF | pdb_00001txf

1VSO | pdb_00001vso

1YCJ | pdb_00001ycj

2F34 | pdb_00002f34

2F35 | pdb_00002f35

2F36 | pdb_00002f36

2OJT | pdb_00002ojt

2PBW | pdb_00002pbw

2QS1 | pdb_00002qs1

2QS2 | pdb_00002qs2

2QS3 | pdb_00002qs3

2QS4 | pdb_00002qs4

2ZNS | pdb_00002zns

2ZNT | pdb_00002znt

2ZNU | pdb_00002znu

3C31 | pdb_00003c31

3C32 | pdb_00003c32

3C33 | pdb_00003c33

3C34 | pdb_00003c34

3C35 | pdb_00003c35

3C36 | pdb_00003c36

3GBA | pdb_00003gba

3GBB | pdb_00003gbb

3S2V | pdb_00003s2v

4DLD | pdb_00004dld