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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Rauvolfia serpentina"

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Search Summary

This query matches 33 Structures.

Refinements

Structure Determination Methodology

experimental (33)

Scientific Name of Source Organism

Rauvolfia serpentina (33)

Taxonomy

Eukaryota (33)

Experimental Method

X-RAY DIFFRACTION (33)

Polymer Entity Type

Protein (33)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (16)
	2.5 - 3.0 (12)
	3.0 - 3.5 (4)

Release Date

	2005 - 2009 (11)
	2010 - 2014 (18)
	2015 - 2019 (1)
	2020 - 2024 (3)

Enzyme Classification Name

	Hydrolases (28)
	Lyases (13)
	Transferases (9)
	Oxidoreductases (4)

Symmetry Type

	Asymmetric (26)
	Dihedral (6)
	Cyclic (4)

SCOP Classification

	Alpha and beta proteins (a/b) (19)
	Artifacts (1)

AllSelected

1 to 25 of 33 Structures

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2BGH \| pdb_00002bgh	Download File View File

Crystal structure of Vinorine Synthase

Ma, X., Koepke, J., Panjikar, S., Fritzsch, G., Stoeckigt, J.

(2005) J Biological Chem 280: 13576

Released	2005-01-24
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Rauvolfia serpentina
Macromolecule	VINORINE SYNTHASE (protein)

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2FP8 \| pdb_00002fp8	Download File View File

Structure of Strictosidine Synthase, the Biosynthetic Entry to the Monoterpenoid Indole Alkaloid Family

Panjikar, S.

(2006) Plant Cell 18: 907-920

Released	2006-05-23
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Rauvolfia serpentina
Macromolecule	Strictosidine synthase (protein)

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2FP9 \| pdb_00002fp9	Download File View File

Crystal structure of Native Strictosidine Synthase

Panjikar, S.

(2006) Plant Cell 18: 907-920

Released	2006-05-23
Method	X-RAY DIFFRACTION 2.96 Å
Organisms	Rauvolfia serpentina
Macromolecule	Strictosidine synthase (protein)
Unique Ligands	TLA

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2FPB \| pdb_00002fpb	Download File View File

Structure of Strictosidine Synthase, the Biosynthetic Entry to the Monoterpenoid Indole Alkaloid Family

Panjikar, S.

(2006) Plant Cell 18: 907-920

Released	2006-05-23
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Rauvolfia serpentina
Macromolecule	Strictosidine Synthase (protein)
Unique Ligands	TSS

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2FPC \| pdb_00002fpc	Download File View File

Structure of Strictosidine Synthase, the Biosynthetic Entry to the Monoterpenoid Indole Alkaloid Family

Panjikar, S.

(2006) Plant Cell 18: 907-920

Released	2006-05-23
Method	X-RAY DIFFRACTION 3 Å
Organisms	Rauvolfia serpentina
Macromolecule	Strictosidine synthase (protein)
Unique Ligands	SCG

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2JF6 \| pdb_00002jf6	Download File View File

Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine

Barleben, L., Panjikar, S., Ruppert, M., Koepke, J., Stockigt, J.

(2007) Plant Cell 19: 2886

Released	2008-02-05
Method	X-RAY DIFFRACTION 2.82 Å
Organisms	Rauvolfia serpentina
Macromolecule	STRICTOSIDINE-O-BETA-D-GLUCOSIDASE (protein)
Unique Ligands	S55

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2JF7 \| pdb_00002jf7	Download File View File

Structure of Strictosidine Glucosidase

Barleben, L., Panjikar, S., Ruppert, M., Koepke, J., Stockigt, J.

(2007) Plant Cell 19: 2886

Released	2008-02-05
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Rauvolfia serpentina
Macromolecule	STRICTOSIDINE-O-BETA-D-GLUCOSIDASE (protein)

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2V91 \| pdb_00002v91	Download File View File

STRUCTURE OF STRICTOSIDINE SYNTHASE IN COMPLEX WITH STRICTOSIDINE

Loris, E.A., Panjikar, S., Ruppert, M., Barleben, L., Unger, M., Stoeckigt, J.

(2007) Chem Biol 14: 979

Released	2008-09-16
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	Rauvolfia serpentina
Macromolecule	STRICTOSIDINE SYNTHASE (protein)
Unique Ligands	S55

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2VAQ \| pdb_00002vaq	Download File View File

STRUCTURE OF STRICTOSIDINE SYNTHASE IN COMPLEX WITH INHIBITOR

Maresh, J., Giddings, L.A., Friedrich, A., Loris, E.A., Panjikar, S., Trout, B.L., Stoeckigt, J., Peters, B., O'Connor, S.E.

(2008) J Am Chem Soc 130: 710-723

Released	2008-09-16
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	Rauvolfia serpentina
Macromolecule	STRICTOSIDINE SYNTHASE (protein)
Unique Ligands	VAW

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2WFL \| pdb_00002wfl	Download File View File

Crystal structure of polyneuridine aldehyde esterase

Yang, L., Hill, M., Panjikar, S., Wang, M., Stoeckigt, J.

(2009) Angew Chem Int Ed Engl 48: 5211

Released	2009-08-18
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rauvolfia serpentina
Macromolecule	POLYNEURIDINE-ALDEHYDE ESTERASE (protein)
Unique Ligands	SO4

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2WFM \| pdb_00002wfm	Download File View File

Crystal structure of polyneuridine aldehyde esterase mutant (H244A)

Yang, L., Hill, M., Panjikar, S., Wang, M., Stoeckigt, J.

(2009) Angew Chem Int Ed Engl 48: 5211

Released	2010-04-21
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Rauvolfia serpentina
Macromolecule	POLYNEURIDINE ALDEHYDE ESTERASE (protein)

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3GZJ \| pdb_00003gzj	Download File View File

Crystal Structure of Polyneuridine Aldehyde Esterase Complexed with 16-epi-Vellosimine

Yang, L., Hill, M., Wang, M., Panjikar, S., Stoeckigt, J.

(2009) Angew Chem Int Ed Engl 48: 5211-5213

Released	2009-08-18
Method	X-RAY DIFFRACTION 2.19 Å
Organisms	Rauvolfia serpentina
Macromolecule	Polyneuridine-aldehyde esterase (protein)
Unique Ligands	EVS

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3U57 \| pdb_00003u57	Download File View File

Structures of Alkaloid Biosynthetic Glucosidases Decode Substrate Specificity

Xia, L., Ruppert, M., Wang, M., Panjikar, S., Lin, H., Rajendran, C., Barleben, L., Stoeckigt, J.

(2012) ACS Chem Biol 7: 226-234

Released	2011-11-30
Method	X-RAY DIFFRACTION 2.43 Å
Organisms	Rauvolfia serpentina
Macromolecule	Raucaffricine-O-beta-D-glucosidase (protein)
Unique Ligands	CL, DH8

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3U5U \| pdb_00003u5u	Download File View File

Structures of Alkaloid Biosynthetic Glucosidases Decode Substrate Specificity

Xia, L., Ruppert, M., Wang, M., Panjikar, S., Lin, H., Rajendran, C., Barleben, L., Stoeckigt, J.

(2012) ACS Chem Biol 7: 226-234

Released	2011-11-30
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Rauvolfia serpentina
Macromolecule	Raucaffricine-O-beta-D-glucosidase (protein)
Unique Ligands	CL

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3U5Y \| pdb_00003u5y	Download File View File

Structures of Alkaloid Biosynthetic Glucosidases Decode Substrate Specificity

Xia, L., Ruppert, M., Wang, M., Panjikar, S., Lin, H., Rajendran, C., Barleben, L., Stoeckigt, J.

(2012) ACS Chem Biol 7: 226-234

Released	2011-11-30
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Rauvolfia serpentina
Macromolecule	Raucaffricine-O-beta-D-glucosidase (protein)
Unique Ligands	CL, SCG

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3UYI \| pdb_00003uyi	Download File View File

Crystal Structure of Perakine Reductase, Founder Member of a Novel AKR Subfamily with Unique Conformational Changes during NADPH Binding

Sun, L., Chen, Y., Rajendran, C., Panjikar, S., Mueller, U., Wang, M., Rosenthal, C., Mindnich, R., Penning, T.M., Stoeckigt, J.

(2012) J Biological Chem 287: 11213-11221

Released	2012-02-22
Method	X-RAY DIFFRACTION 2.313 Å
Organisms	Rauvolfia serpentina
Macromolecule	Perakine reductase (protein)

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3V0S \| pdb_00003v0s	Download File View File

Crystal Structure of Perakine Reductase, Founder Member of a Novel AKR Subfamily with Unique Conformational Changes during NADPH Binding

Sun, L., Chen, Y., Rajendran, C., Panjikar, S., Mueller, U., Wang, M., Rosenthal, C., Mindnich, R., Penning, T.M., Stoeckigt, J.

(2012) J Biological Chem 287: 11213-11221

Released	2012-02-22
Method	X-RAY DIFFRACTION 1.773 Å
Organisms	Rauvolfia serpentina
Macromolecule	Perakine reductase (protein)
Unique Ligands	ATR

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3V0T \| pdb_00003v0t	Download File View File

Crystal Structure of Perakine Reductase, Founder Member of a Novel AKR Subfamily with Unique Conformational Changes during NADPH Binding

Sun, L., Chen, Y., Rajendran, C., Panjikar, S., Mueller, U., Wang, M., Rosenthal, C., Mindnich, R., Penning, T.M., Stoeckigt, J.

(2012) J Biological Chem 287: 11213-11221

Released	2012-02-22
Method	X-RAY DIFFRACTION 2.333 Å
Organisms	Rauvolfia serpentina
Macromolecule	Perakine Reductase (protein)
Unique Ligands	ATR

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3V0U \| pdb_00003v0u	Download File View File

Crystal Structure of Perakine Reductase, Founder Member of a Novel AKR Subfamily with Unique Conformational Changes during NADPH Binding

Sun, L., Chen, Y., Rajendran, C., Panjikar, S., Mueller, U., Wang, M., Rosenthal, C., Mindnich, R., Penning, T.M., Stoeckigt, J.

(2012) J Biological Chem 287: 11213-11221

Released	2012-02-22
Method	X-RAY DIFFRACTION 2.203 Å
Organisms	Rauvolfia serpentina
Macromolecule	Perakine reductase (protein)

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3V1S \| pdb_00003v1s	Download File View File

Scaffold tailoring by a newly detected Pictet-Spenglerase ac-tivity of strictosidine synthase (STR1): from the common tryp-toline skeleton to the rare piperazino-indole framework

Wu, F., Zhu, H., Sun, L., Rajendran, C., Wang, M., Ren, X., Panjikar, S., Cherkasov, A., Zou, H., Stoeckigt, J.

(2012) J Am Chem Soc 134: 1498-1500

Released	2012-02-29
Method	X-RAY DIFFRACTION 2.328 Å
Organisms	Rauvolfia serpentina
Macromolecule	Strictosidine synthase (protein)
Unique Ligands	0LH

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3ZJ6 \| pdb_00003zj6	Download File View File

Crystal of Raucaffricine Glucosidase in complex with inhibitor

Xia, L., Lin, H., Panjikar, S., Ruppert, M., Castiglia, A., Rajendran, C., Wang, M., Schuebel, H., Warzecha, H., Jaeger, V., Stoeckigt, J.

(2015) J Enzyme Inhib Med Chem 30: 472

Released	2014-01-29
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Rauvolfia serpentina
Macromolecule	RAUCAFFRICINE-O-BETA-D-GLUCOSIDASE (protein)
Unique Ligands	SO4, VM2

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3ZJ7 \| pdb_00003zj7	Download File View File

Crystal structure of strictosidine glucosidase in complex with inhibitor-1

Xia, L., Lin, H., Panjikar, S., Ruppert, M., Castiglia, A., Rajendran, C., Wang, M., Schuebel, H., Warzecha, H., Jaeger, V., Stoeckigt, J.

(2015) J Enzyme Inhib Med Chem 30: 472

Released	2014-02-05
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Rauvolfia serpentina
Macromolecule	STRICTOSIDINE-O-BETA-D-GLUCOSIDASE (protein)
Unique Ligands	C1K

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3ZJ8 \| pdb_00003zj8	Download File View File

Crystal structure of strictosidine glucosidase in complex with inhibitor-2

Xia, L., Lin, H., Panjikar, S., Ruppert, M., Castiglia, A., Rajendran, C., Wang, M., Schuebel, H., Warzecha, H., Jaeger, V., Stoeckigt, J.

(2015) J Enzyme Inhib Med Chem 30: 472

Released	2014-02-05
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	Rauvolfia serpentina
Macromolecule	STRICTOSIDINE-O-BETA-D-GLUCOSIDASE (protein)
Unique Ligands	LR1

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4A3Y \| pdb_00004a3y	Download File View File

Crystal structure of Raucaffricine glucosidase from ajmaline biosynthesis pathway

Xia, L., Ruppert, M., Wang, M., Panjikar, S., Barleben, L., Rajendran, C., Lin, H., Stoeckigt, J.

(2012) ACS Chem Biol 7: 226

Released	2012-08-15
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Rauvolfia serpentina
Macromolecule	RAUCAFFRICINE-O-BETA-D-GLUCOSIDASE (protein)
Unique Ligands	GOL, SO4

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4ATD \| pdb_00004atd	Download File View File

Crystal structure of native Raucaffricine glucosidase

Xia, L., Rajendran, C., Ruppert, M., Panjikar, S., Wang, M., Stoeckigt, J.

(2013) Phytochemistry 91: 88

Released	2013-01-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rauvolfia serpentina
Macromolecule	RAUCAFFRICINE-O-BETA-D-GLUCOSIDASE (protein)
Unique Ligands	SO4

1 to 25 of 33 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2BGH | pdb_00002bgh

2FP8 | pdb_00002fp8

2FP9 | pdb_00002fp9

2FPB | pdb_00002fpb

2FPC | pdb_00002fpc

2JF6 | pdb_00002jf6

2JF7 | pdb_00002jf7

2V91 | pdb_00002v91

2VAQ | pdb_00002vaq

2WFL | pdb_00002wfl

2WFM | pdb_00002wfm

3GZJ | pdb_00003gzj

3U57 | pdb_00003u57

3U5U | pdb_00003u5u

3U5Y | pdb_00003u5y

3UYI | pdb_00003uyi

3V0S | pdb_00003v0s

3V0T | pdb_00003v0t

3V0U | pdb_00003v0u

3V1S | pdb_00003v1s

3ZJ6 | pdb_00003zj6

3ZJ7 | pdb_00003zj7

3ZJ8 | pdb_00003zj8

4A3Y | pdb_00004a3y

4ATD | pdb_00004atd