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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "rmlA"

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Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

	Aneurinibacillus thermoaerophilus (9)
	Pseudomonas aeruginosa (3)
	Escherichia coli (2)
	Mycobacterium tuberculosis H37Rv (2)
	Salmonella enterica subsp. enterica serovar Typhimurium (2)
	Methanothermobacter thermautotrophicus (1)
	Pseudomonas aeruginosa PAO1 (1)

Taxonomy

	Bacteria (19)
	Archaea (1)

Experimental Method

X-RAY DIFFRACTION (20)

Polymer Entity Type

Protein (20)

Refinement Resolution (Å)

	1.5 - 2.0 (11)
	2.0 - 2.5 (7)
	2.5 - 3.0 (2)

Release Date

	2000 - 2004 (3)
	2010 - 2014 (11)
	2015 - 2019 (2)
	2020 - 2024 (4)

Enzyme Classification Name

Transferases (20)

Symmetry Type

	Dihedral (18)
	Asymmetric (10)
	Cyclic (2)

SCOP Classification

	Alpha and beta proteins (a/b) (19)
	Artifacts (2)

AllSelected

1 to 20 of 20 Structures

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1H5S \| pdb_00001h5s	Download File View File

Thymidylyltransferase complexed with TMP

Rosano, C., Zuccotti, S., Bolognesi, M.

(2001) J Mol Biology 313: 831-843

Released	2001-11-23
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	Glucose-1-phosphate thymidylyltransferase 1 (protein)
Unique Ligands	TMP

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1H5T \| pdb_00001h5t	Download File View File

Thymidylyltransferase complexed with Thymidylyldiphosphate-glucose

Rosano, C., Zuccotti, S., Bolognesi, M.

(2001) J Mol Biology 313: 831

Released	2001-11-23
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli
Macromolecule	Glucose-1-phosphate thymidylyltransferase 1 (protein)
Unique Ligands	DAU, SO4, TYD

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1LVW \| pdb_00001lvw	Download File View File

Crystal structure of glucose-1-phosphate thymidylyltransferase, RmlA, complex with dTDP

Dong, A., Christendat, D., Pai, E.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2003-07-29
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	CL, GOL, SO4, TYD

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3PKP \| pdb_00003pkp	Download File View File

Q83S Variant of S. Enterica RmlA with dATP

Chang, A., Moretti, R., Bingman, C.A., Thorson, J.S., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)

(2011) J Biological Chem 286: 13235-13243

Released	2011-01-12
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	DTP, MG

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3PKQ \| pdb_00003pkq	Download File View File

Q83D Variant of S. Enterica RmlA with dGTP

Chang, A., Moretti, R., Bingman, C.A., Thorson, J.S., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)

(2011) J Biological Chem 286: 13235-13243

Released	2011-01-12
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	DGT, MG, PEG

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4HO0 \| pdb_00004ho0	Download File View File

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus

Chen, T.J., Chien, W.T., Lin, C.C., Wang, W.C.

To be published

Released	2013-10-23
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Aneurinibacillus thermoaerophilus
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	SO4

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4HO2 \| pdb_00004ho2	Download File View File

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with thymidine

Chen, T.J., Chien, W.T., Lin, C.C., Wang, W.C.

To be published

Released	2013-10-23
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Aneurinibacillus thermoaerophilus
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	SO4, THM

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4HO3 \| pdb_00004ho3	Download File View File

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with thymidine triphosphate

Chen, T.J., Chien, W.T., Lin, C.C., Wang, W.C.

To be published

Released	2013-10-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Aneurinibacillus thermoaerophilus
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	SO4, TTP

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4HO4 \| pdb_00004ho4	Download File View File

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with thymidine and glucose-1-phosphate

Chen, T.J., Chien, W.T., Lin, C.C., Wang, W.C.

To be published

Released	2013-10-23
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Aneurinibacillus thermoaerophilus
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	G1P, SO4, THM

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4HO5 \| pdb_00004ho5	Download File View File

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with TDP-glucose

Chen, T.J., Chien, W.T., Lin, C.C., Wang, W.C.

To be published

Released	2013-10-23
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Aneurinibacillus thermoaerophilus
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	DAU, SO4

Explore in 3D

4HO6 \| pdb_00004ho6	Download File View File

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with UDP-glucose and UTP

Chen, T.J., Chien, W.T., Lin, C.C., Wang, W.C.

To be published

Released	2013-10-23
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Aneurinibacillus thermoaerophilus
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	SO4, UPG, UTP

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4HO8 \| pdb_00004ho8	Download File View File

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with UDP-glucose and thymidine

Chen, T.J., Chien, W.T., Lin, C.C., Wang, W.C.

To be published

Released	2013-10-23
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Aneurinibacillus thermoaerophilus
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	SO4, THM, UPG

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4HO9 \| pdb_00004ho9	Download File View File

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with UDP-galactose and UTP

Chen, T.J., Chien, W.T., Lin, C.C., Wang, W.C.

To be published

Released	2013-10-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Aneurinibacillus thermoaerophilus
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	GDU, SO4, UTP

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4HOC \| pdb_00004hoc	Download File View File

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with UDP-N-acetylglucosamine

Chen, T.J., Chien, W.T., Lin, C.C., Wang, W.C.

To be published

Released	2013-10-23
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Aneurinibacillus thermoaerophilus
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	SO4, UD1

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6B5E \| pdb_00006b5e	Download File View File

Mycobacterium tuberculosis RmlA in complex with dTDP-glucose

Brown, H.A., Holden, H.M.

(2018) Protein Sci 27: 441-450

Released	2018-02-21
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	CL, DAU, EDO, MG, NA, TYD

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6B5K \| pdb_00006b5k	Download File View File

Mycobacterium tuberculosis RmlA in complex with Mg/dTTP

Brown, H.A., Holden, H.A.

(2018) Protein Sci 27: 441-450

Released	2018-02-21
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	EDO, MG, TTP, TYD

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6T37 \| pdb_00006t37	Download File View File

Pseudomonas aeruginosa RmlA in complex with allosteric inhibitor

Alphey, M.S., Xiao, G., Westwood, J.N.

(2021) Bioorg Med Chem 50: 116477-116477

Released	2020-08-19
Method	X-RAY DIFFRACTION 2.079 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	CL, M9Z, MES

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6T38 \| pdb_00006t38	Download File View File

Pseudomonas aeruginosa RmlA in complex with allosteric inhibitor

Alphey, M.S., Xiao, G., Westwood, J.N.

(2021) Bioorg Med Chem 50: 116477-116477

Released	2020-08-19
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	BR, CL, MBK, MES

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6TQG \| pdb_00006tqg	Download File View File

Pseudomonas aeruginosa RmlA in complex with allosteric inhibitor

Alphey, M.S., Xiao, G., Westwood, J.N.

(2021) Bioorg Med Chem 50: 116477-116477

Released	2020-08-19
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Glucose-1-phosphate thymidylyltransferase (protein)
Unique Ligands	CL, MES, NVQ

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8HHD \| pdb_00008hhd	Download File View File

Crystal structure of PaMurU

Shin, D.H., Jo, S.R., Kim, M.S.

To be published

Released	2023-11-22
Method	X-RAY DIFFRACTION 2.27 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Nucleotidyl transferase (protein)
Unique Ligands	EPE, SO4

1 to 20 of 20 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1H5S | pdb_00001h5s

Thymidylyltransferase complexed with TMP

1H5T | pdb_00001h5t

Thymidylyltransferase complexed with Thymidylyldiphosphate-glucose

1LVW | pdb_00001lvw

Crystal structure of glucose-1-phosphate thymidylyltransferase, RmlA, complex with dTDP

3PKP | pdb_00003pkp

Q83S Variant of S. Enterica RmlA with dATP

3PKQ | pdb_00003pkq

Q83D Variant of S. Enterica RmlA with dGTP

4HO0 | pdb_00004ho0

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus

4HO2 | pdb_00004ho2

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with thymidine

4HO3 | pdb_00004ho3

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with thymidine triphosphate

4HO4 | pdb_00004ho4

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with thymidine and glucose-1-phosphate

4HO5 | pdb_00004ho5

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with TDP-glucose

4HO6 | pdb_00004ho6

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with UDP-glucose and UTP

4HO8 | pdb_00004ho8

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with UDP-glucose and thymidine

4HO9 | pdb_00004ho9

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with UDP-galactose and UTP

4HOC | pdb_00004hoc

Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with UDP-N-acetylglucosamine

6B5E | pdb_00006b5e

Mycobacterium tuberculosis RmlA in complex with dTDP-glucose

6B5K | pdb_00006b5k

Mycobacterium tuberculosis RmlA in complex with Mg/dTTP

6T37 | pdb_00006t37

Pseudomonas aeruginosa RmlA in complex with allosteric inhibitor

6T38 | pdb_00006t38

Pseudomonas aeruginosa RmlA in complex with allosteric inhibitor

6TQG | pdb_00006tqg

Pseudomonas aeruginosa RmlA in complex with allosteric inhibitor

8HHD | pdb_00008hhd

Crystal structure of PaMurU

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1H5S | pdb_00001h5s

1H5T | pdb_00001h5t

1LVW | pdb_00001lvw

3PKP | pdb_00003pkp

3PKQ | pdb_00003pkq

4HO0 | pdb_00004ho0

4HO2 | pdb_00004ho2

4HO3 | pdb_00004ho3

4HO4 | pdb_00004ho4

4HO5 | pdb_00004ho5

4HO6 | pdb_00004ho6

4HO8 | pdb_00004ho8

4HO9 | pdb_00004ho9

4HOC | pdb_00004hoc

6B5E | pdb_00006b5e

6B5K | pdb_00006b5k

6T37 | pdb_00006t37

6T38 | pdb_00006t38

6TQG | pdb_00006tqg

8HHD | pdb_00008hhd