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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "SHMT"

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This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Glycine max (7)
	Geobacillus stearothermophilus (3)

Taxonomy

	Eukaryota (7)
	Bacteria (3)

Experimental Method

X-RAY DIFFRACTION (10)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (2)
	2.0 - 2.5 (7)

Release Date

	2005 - 2009 (3)
	2020 - 2024 (7)

Enzyme Classification Name

Transferases (10)

Symmetry Type

	Dihedral (7)
	Cyclic (3)

SCOP Classification

	Alpha and beta proteins (a/b) (8)
	Artifacts (5)

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1 to 10 of 10 Structures

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1YJS \| pdb_00001yjs	Download File View File

K226Q Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus, Complex With Glycine

Bhavani, S., Trivedi, V., Jala, V.R., Subramanya, H.S., Kaul, P., Purnima, K., Prakash, V., Appaji, R.N., Savithri, H.S.

(2005) Biochemistry 44: 6929-6937

Released	2005-05-31
Method	X-RAY DIFFRACTION 2 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	SERINE HYDROXYMETHYLTRANSFERASE (protein)
Unique Ligands	GLY, PLP

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1YJY \| pdb_00001yjy	Download File View File

K226M Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus, Complex With Serine

Bhavani, S., Trivedi, V., Jala, V.R., Subramanya, H.S., Kaul, P., Purnima, K., Prakash, V., Appaji, R.N., Savithri, H.S.

(2005) Biochemistry 44: 6929-6937

Released	2005-05-31
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	SERINE HYDROXYMETHYLTRANSFERASE (protein)
Unique Ligands	PLP, SER

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1YJZ \| pdb_00001yjz	Download File View File

K226M Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus

Bhavani, S., Trivedi, V., Jala, V.R., Subramanya, H.S., Kaul, P., Purnima, K., Prakash, V., Appaji, R.N., Savithri, H.S.

(2005) Biochemistry 44: 6929-6937

Released	2005-06-14
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	SERINE HYDROXYMETHYLTRANSFERASE (protein)
Unique Ligands	PLP

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6UXH \| pdb_00006uxh	Download File View File

Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP

Korasick, D.A., Tanner, J.J., Beamer, L.J.

(2020) J Biological Chem 295: 3708-3718

Released	2020-02-12
Method	X-RAY DIFFRACTION 1.858 Å
Organisms	Glycine max
Macromolecule	Serine hydroxymethyltransferase (protein)
Unique Ligands	EDO

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6UXI \| pdb_00006uxi	Download File View File

Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP-Glycine

Korasick, D.A., Tanner, J.J., Beamer, L.J.

(2020) J Biological Chem 295: 3708-3718

Released	2020-02-12
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Glycine max
Macromolecule	Serine hydroxymethyltransferase (protein)
Unique Ligands	EDO, PLG

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6UXJ \| pdb_00006uxj	Download File View File

Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP-glycine and 5-formyltetrahydrofolate

Korasick, D.A., Tanner, J.J., Beamer, L.J.

(2020) J Biological Chem 295: 3708-3718

Released	2020-02-12
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Glycine max
Macromolecule	Serine hydroxymethyltransferase (protein)
Unique Ligands	EDO, FFO, PLG

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6UXK \| pdb_00006uxk	Download File View File

Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Forrest complexed with PLP

Korasick, D.A., Tanner, J.J., Beamer, L.J.

(2020) J Biological Chem 295: 3708-3718

Released	2020-02-12
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Glycine max
Macromolecule	Serine hydroxymethyltransferase (protein)
Unique Ligands	EDO

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6UXL \| pdb_00006uxl	Download File View File

Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Forrest complexed with PLP-Glycine

Korasick, D.A., Tanner, J.J., Beamer, L.J.

(2020) J Biological Chem 295: 3708-3718

Released	2020-02-12
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Glycine max
Macromolecule	Serine hydroxymethyltransferase (protein)
Unique Ligands	PLG

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9CE6 \| pdb_00009ce6	Download File View File

Key structural role for the conserved cis-proline of soybean serine hydroxymethyltransferase

Beamer, L.J., Samarakoon, V.

(2024) Biochem J 481: 1557-1568

Released	2024-10-16
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Glycine max
Macromolecule	Serine hydroxymethyltransferase (protein)

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9CG8 \| pdb_00009cg8	Download File View File

CRYSTAL STRUCTURE OF THE P285S VARIANT OF SERINE HYDROXYMETHYLTRANSFERASE 8 FROM SOYBEAN CULTIVAR FORREST

Beamer, L.J., Samarakoon, V., Owuocha, L.F.

(2024) Biochem J 481: 1557-1568

Released	2024-10-16
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Glycine max
Macromolecule	Serine hydroxymethyltransferase (protein)

1 to 10 of 10 Structures

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1YJS | pdb_00001yjs

K226Q Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus, Complex With Glycine

1YJY | pdb_00001yjy

K226M Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus, Complex With Serine

1YJZ | pdb_00001yjz

K226M Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus

6UXH | pdb_00006uxh

Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP

6UXI | pdb_00006uxi

Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP-Glycine

6UXJ | pdb_00006uxj

Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP-glycine and 5-formyltetrahydrofolate

6UXK | pdb_00006uxk

Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Forrest complexed with PLP

6UXL | pdb_00006uxl

Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Forrest complexed with PLP-Glycine

9CE6 | pdb_00009ce6

Key structural role for the conserved cis-proline of soybean serine hydroxymethyltransferase

9CG8 | pdb_00009cg8

CRYSTAL STRUCTURE OF THE P285S VARIANT OF SERINE HYDROXYMETHYLTRANSFERASE 8 FROM SOYBEAN CULTIVAR FORREST

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1YJS | pdb_00001yjs

1YJY | pdb_00001yjy

1YJZ | pdb_00001yjz

6UXH | pdb_00006uxh

6UXI | pdb_00006uxi

6UXJ | pdb_00006uxj

6UXK | pdb_00006uxk

6UXL | pdb_00006uxl

9CE6 | pdb_00009ce6

9CG8 | pdb_00009cg8