RCSB PDB: Search

5ZIB \| pdb_00005zib	Download File View File

Crystal structure of human GnT-V luminal domain in apo form

Nagae, M., Yamaguchi, Y.

(2018) Nat Commun 9: 3380-3380

Released	2018-08-01
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (protein)
Unique Ligands	NAG

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5ZIC \| pdb_00005zic	Download File View File

Crystal structure of human GnT-V luminal domain in complex with acceptor sugar

Nagae, M., Yamaguchi, Y.

(2018) Nat Commun 9: 3380-3380

Released	2018-08-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (protein)
Unique branched monosaccharides	BMA, NAG, Z4Y

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6YJQ \| pdb_00006yjq	Download File View File

Crystal structure of unliganded MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation

Wu, L., Darby, J.F., Gilio, A.K., Davies, G.J.

(2020) ACS Catal

Released	2020-08-05
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A,Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (protein)
Unique Ligands	EDO, NAG, SO4

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6YJR \| pdb_00006yjr	Download File View File

Crystal structure of unliganded MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain.

Wu, L., Darby, J.F., Gilio, A.K., Davies, G.J.

(2020) ACS Catal

Released	2020-08-05
Method	X-RAY DIFFRACTION 2.198 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (protein)
Unique Ligands	EDO, NAG
Unique branched monosaccharides	FUC, NAG

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6YJS \| pdb_00006yjs	Download File View File

Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with biantennary pentasaccharide M592

Wu, L., Darby, J.F., Gilio, A.K., Davies, G.J.

(2020) ACS Catal

Released	2020-08-05
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (protein)
Unique Ligands	EDO, NAG, SO4
Unique branched monosaccharides	MAN, NAG

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6YJT \| pdb_00006yjt	Download File View File

Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with UDP

Wu, L., Darby, J.F., Gilio, A.K., Davies, G.J.

(2020) ACS Catal

Released	2020-08-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (protein)
Unique Ligands	EDO, NAG, SO4, UDP

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6YJU \| pdb_00006yju	Download File View File

Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with UDP and biantennary pentasaccharide M592

Wu, L., Darby, J.F., Gilio, A.K., Davies, G.J.

(2020) ACS Catal

Released	2020-08-05
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (protein)
Unique Ligands	EDO, SO4, UDP
Unique branched monosaccharides	MAN, NAG

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6YJV \| pdb_00006yjv	Download File View File

Crystal structure of unliganded MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with UDP-2-deoxy-2-fluoroglucose and biantennary pentasaccharide M592

Wu, L., Darby, J.F., Gilio, A.K., Davies, G.J.

(2020) ACS Catal

Released	2020-08-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (protein)
Unique Ligands	EDO, SO4, U2F
Unique branched monosaccharides	MAN, NAG

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8CE3 \| pdb_00008ce3	Download File View File

Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with 3D fragment 2548

Gilio, A.K., Darby, J.F., Wu, L., Davies, G.J.

To be published

Released	2024-02-21
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (protein)
Unique Ligands	EDO, SO4, UE0

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9F5H \| pdb_00009f5h	Download File View File

Crystal structure of MGAT5 bump-and-hole mutant in complex with UDP and M592

Liu, Y., Bineva-Todd, G., Meek, R., Mazo, L., Piniello, B., Moroz, O.V., Begum, N., Roustan, C., Tomita, S., Kjaer, S., Rovira, C., Davies, G.J., Schumann, B.

(2024) J Am Chem Soc 146: 26707-26718

Released	2024-10-02
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Homo sapiens
Macromolecule	Secreted alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (protein)
Unique Ligands	MAN, NAG, SO4, UDP

5ZIB | pdb_00005zib

Crystal structure of human GnT-V luminal domain in apo form

5ZIC | pdb_00005zic

Crystal structure of human GnT-V luminal domain in complex with acceptor sugar

6YJQ | pdb_00006yjq

Crystal structure of unliganded MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation

6YJR | pdb_00006yjr

Crystal structure of unliganded MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain.

6YJS | pdb_00006yjs

Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with biantennary pentasaccharide M592

6YJT | pdb_00006yjt

Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with UDP

6YJU | pdb_00006yju

Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with UDP and biantennary pentasaccharide M592

6YJV | pdb_00006yjv

Crystal structure of unliganded MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with UDP-2-deoxy-2-fluoroglucose and biantennary pentasaccharide M592

8CE3 | pdb_00008ce3

Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with 3D fragment 2548

9F5H | pdb_00009f5h

Crystal structure of MGAT5 bump-and-hole mutant in complex with UDP and M592

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5ZIB | pdb_00005zib

5ZIC | pdb_00005zic

6YJQ | pdb_00006yjq

6YJR | pdb_00006yjr

6YJS | pdb_00006yjs

6YJT | pdb_00006yjt

6YJU | pdb_00006yju

6YJV | pdb_00006yjv

8CE3 | pdb_00008ce3

9F5H | pdb_00009f5h