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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "GZMA"

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Search Summary

This query matches 15 Structures.

Refinements

Structure Determination Methodology

experimental (15)

Scientific Name of Source Organism

	Escherichia coli (3)
	Homo sapiens (3)
	Methanocaldococcus jannaschii (2)
	Mycobacterium tuberculosis H37Rv (2)
	Agrobacterium fabrum str. C58 (1)
	Anaplasma phagocytophilum str. HZ (1)
	Burkholderia thailandensis E264 (1)
	Halalkalibacterium halodurans C-125 (1)
	Thermococcus pacificus (1)

Taxonomy

	Bacteria (9)
	Archaea (3)
	Eukaryota (3)

Experimental Method

	X-RAY DIFFRACTION (13)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (15)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (2)
	2.0 - 2.5 (8)
	2.5 - 3.0 (2)

Release Date

	2000 - 2004 (3)
	2005 - 2009 (6)
	2010 - 2014 (2)
	2015 - 2019 (3)
	2020 - 2024 (1)

Enzyme Classification Name

Hydrolases (14)

Membrane Protein Annotation

OPM (3)

Symmetry Type

	Cyclic (9)
	Dihedral (8)
	Asymmetric (5)
	Octahedral (1)

SCOP Classification

All beta proteins (8)

AllSelected

1 to 15 of 15 Structures

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1XS1 \| pdb_00001xs1	Download File View File

dCTP deaminase from Escherichia coli in complex with dUTP

Johansson, E., Fano, M., Bynck, J.H., Neuhard, J., Larsen, S., Sigurskjold, B.W., Christensen, U., Willemoes, M.

(2005) J Biological Chem 280: 3051-3059

Released	2004-12-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli
Macromolecule	Deoxycytidine triphosphate deaminase (protein)
Unique Ligands	DUT, MG

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1XS4 \| pdb_00001xs4	Download File View File

dCTP deaminase from Escherichia coli- E138A mutant enzyme in complex with dCTP

Johansson, E., Fano, M., Bynck, J.H., Neuhard, J., Larsen, S., Sigurskjold, B.W., Christensen, U., Willemoes, M.

(2005) J Biological Chem 280: 3051-3059

Released	2004-12-21
Method	X-RAY DIFFRACTION 2.53 Å
Organisms	Escherichia coli
Macromolecule	Deoxycytidine triphosphate deaminase (protein)
Unique Ligands	DCP, MG

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1XS6 \| pdb_00001xs6	Download File View File

dCTP deaminase from Escherichia coli. E138A mutant enzyme in complex with dUTP

Johansson, E., Fano, M., Bynck, J.H., Neuhard, J., Larsen, S., Sigurskjold, B.W., Christensen, U., Willemoes, M.

(2005) J Biological Chem 280: 3051-3059

Released	2004-12-21
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	Deoxycytidine triphosphate deaminase (protein)
Unique Ligands	DUT, MG

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2HXB \| pdb_00002hxb	Download File View File

dCTP deaminase-dUTPase from Methanocaldococcus jannaschii

Bynck, J.H., Johansson, E.

To be published

Released	2007-08-14
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	dCTP deaminase, dUMP-forming (protein)

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2HXD \| pdb_00002hxd	Download File View File

Bifunctional dCTP deaminase-dUTPase mutant enzyme variant E145A from Methanocaldococcus jannaschii in complex with alpha,beta-imido dUTP and magnesium

Bynck, J.H., Johansson, E.

To be published

Released	2007-08-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	dCTP deaminase, dUMP-forming (protein)
Unique Ligands	DUP, MG

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2KSG \| pdb_00002ksg	Download File View File

Solution structure of dermcidin-1L, a human antibiotic peptide

Jung, H., Yang, S., Kim, J.

To be published

Released	2010-03-02
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Dermcidin (protein)

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2NDK \| pdb_00002ndk	Download File View File

20 lowest energy ensemble of dermcidin (DCD1L) NMR structure

Tan, K.W., Mok, Y.K.

(2017) Sci Rep 7: 13923-13923

Released	2017-07-05
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Dermcidin (protein)

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2QLP \| pdb_00002qlp	Download File View File

Bifunctional dCTP deaminase:dUTPase from Mycobacterium tuberculosis, apo form

Christophersen, S., Harris, P., Willemoes, M.

(2007) J Mol Biology 376: 554-569

Released	2008-02-19
Method	X-RAY DIFFRACTION 2.47 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Deoxycytidine triphosphate deaminase (protein)
Unique Ligands	1PE

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2QXX \| pdb_00002qxx	Download File View File

Bifunctional dCTP deaminase: dUTPase from Mycobacterium tuberculosis in complex with dTTP

Christophersen, S., Harris, P., Willemoes, M.

(2008) J Mol Biology 376: 554-569

Released	2008-02-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Deoxycytidine triphosphate deaminase (protein)
Unique Ligands	1PE, MG, TTP

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2R9Q \| pdb_00002r9q	Download File View File

Crystal structure of 2'-deoxycytidine 5'-triphosphate deaminase from Agrobacterium tumefaciens

Zhang, R., Dong, A., Xu, X., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2007-10-02
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Agrobacterium fabrum str. C58
Macromolecule	2'-deoxycytidine 5'-triphosphate deaminase (protein) Synthetic peptide 1 (protein) Synthetic peptide 2 (protein)

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3KM3 \| pdb_00003km3	Download File View File

Crystal structure of eoxycytidine triphosphate deaminase from anaplasma phagocytophilum at 2.1A resolution

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

(2011) J Struct Funct Genomics 12: 83-95

Released	2009-11-24
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Anaplasma phagocytophilum str. HZ
Macromolecule	Deoxycytidine triphosphate deaminase (protein)
Unique Ligands	IOD

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4DHK \| pdb_00004dhk	Download File View File

Crystal structure of a deoxycytidine triphosphate deaminase (dCTP deaminase) from Burkholderia thailandensis

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

(2013) PLoS One 8: e53851-e53851

Released	2012-03-14
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Burkholderia thailandensis E264
Macromolecule	Deoxycytidine triphosphate deaminase (protein)
Unique Ligands	EDO

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4XJC \| pdb_00004xjc	Download File View File

dCTP deaminase-dUTPase from Bacillus halodurans

Oehlenschlaeger, C., Loevgreen, M., Willemoes, M., Harris, P.

(2015) Appl Environ Microbiol 81: 3395-3404

Released	2015-03-18
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Halalkalibacterium halodurans C-125
Macromolecule	Deoxycytidine triphosphate deaminase (protein)
Unique Ligands	MG, PEG, TTP