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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Chemical ID(s) = VO4

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Search Summary

This query matches 137 Structures.

Refinements

Structure Determination Methodology

experimental (137)

Scientific Name of Source Organism

	Homo sapiens (36)
	Curvularia inaequalis (8)
	Dictyostelium discoideum (8)
	Bos taurus (7)
	Corallina pilulifera (4)
	Escherichia coli K-12 (4)
	Sus scrofa (4)
	Arabidopsis thaliana (3)
	Escherichia coli (3)
	Mycobacterium tuberculosis H37Rv (3)

More...

Taxonomy

	Eukaryota (90)
	Bacteria (41)
	Archaea (2)
	Duplodnaviria (2)
	other sequences (2)
	Riboviria (1)
	Varidnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (116)
	ELECTRON MICROSCOPY (21)

Polymer Entity Type

	Protein (137)
	DNA (15)
	RNA (4)

Refinement Resolution (Å)

	1.0 - 1.5 (10)
	1.5 - 2.0 (24)
	2.0 - 2.5 (64)
	2.5 - 3.0 (13)
	3.0 - 3.5 (15)
	3.5 - 4.0 (7)
	4.0 - 4.5 (4)

Release Date

	1985 - 1989 (1)
	1990 - 1994 (1)
	1995 - 1999 (8)
	2000 - 2004 (18)
	2005 - 2009 (22)
	2010 - 2014 (26)
	2015 - 2019 (20)
	2020 - 2024 (37)
	2025 - 2029 (4)

Enzyme Classification Name

	Hydrolases (62)
	Oxidoreductases (17)
	Translocases (12)
	Isomerases (4)
	Transferases (7)
	Ligases (2)
	Lyases (1)

Membrane Protein Annotation

	PDBTM (15)
	mpstruc (10)
	MemProtMD (9)
	OPM (8)

Symmetry Type

	Asymmetric (106)
	Cyclic (33)
	Dihedral (2)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (44)
	Alpha and beta proteins (a+b) (15)
	All alpha proteins (16)
	All beta proteins (9)
	Artifacts (6)
	Membrane and cell surface proteins and peptides (2)
	Multi-domain proteins (alpha and beta) (1)

AllSelected

1 to 25 of 137 Structures

Page 1 of 6

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1BO6 \| pdb_00001bo6	Download File View File

ESTROGEN SULFOTRANSFERASE WITH INACTIVE COFACTOR PAP AND VANADATE

Kakuta, Y., Negishi, M., Pedersen, L.C.

(1998) J Biological Chem 273: 27325-27330

Released	1999-08-10
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mus musculus
Macromolecule	ESTROGEN SULFOTRANSFERASE (protein)
Unique Ligands	A3P, VO4

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1DFL \| pdb_00001dfl	Download File View File

SCALLOP MYOSIN S1 COMPLEXED WITH MGADP:VANADATE-TRANSITION STATE

Houdusse, A., Szent-Gyorgyi, A.G., Cohen, C.

(2000) Proc Natl Acad Sci U S A 97: 11238-11243

Released	2000-10-25
Method	X-RAY DIFFRACTION 4.2 Å
Organisms	Argopecten irradians
Macromolecule	MYOSIN HEAD (protein)
Unique Ligands	ADP, CA, MG, VO4

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1IDQ \| pdb_00001idq	Download File View File

CRYSTAL STRUCTURE OF NATIVE VANADIUM-CONTAINING CHLOROPEROXIDASE FROM CURVULARIA INAEQUALIS

Messerschmidt, A., Prade, L., Wever, R.

(1997) Biol Chem 378: 309-315

Released	2001-04-11
Method	X-RAY DIFFRACTION 2.03 Å
Organisms	Curvularia inaequalis
Macromolecule	VANADIUM CHLOROPEROXIDASE (protein)
Unique Ligands	VO4

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1IDU \| pdb_00001idu	Download File View File

CRYSTAL STRUCTURE OF THE PEROXIDE FORM OF THE VANADIUM-CONTAINING CHLOROPEROXIDASE FROM CURVULARIA INAEQUALIS

Messerschmidt, A., Prade, L., Wever, R.

(1997) Biol Chem 378: 309-315

Released	2001-04-11
Method	X-RAY DIFFRACTION 2.24 Å
Organisms	Curvularia inaequalis
Macromolecule	VANADIUM CHLOROPEROXIDASE (protein)
Unique Ligands	VO4

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1J9L \| pdb_00001j9l	Download File View File

CRYSTAL STRUCTURE OF SURE PROTEIN FROM T.MARITIMA IN COMPLEX WITH VANADATE

Suh, S.W., Lee, J.Y., Kwak, J.E., Moon, J.

(2001) Nat Struct Biol 8: 789-794

Released	2001-09-12
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermotoga maritima
Macromolecule	STATIONARY PHASE SURVIVAL PROTEIN (protein)
Unique Ligands	CA, EPE, VO4

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1LKX \| pdb_00001lkx	Download File View File

MOTOR DOMAIN OF MYOE, A CLASS-I MYOSIN

Kollmar, M., Durrwang, U., Kliche, W., Manstein, D.J., Kull, F.J.

(2002) EMBO J 21: 2517-2525

Released	2002-06-26
Method	X-RAY DIFFRACTION 3 Å
Organisms	Dictyostelium discoideum
Macromolecule	MYOSIN IE HEAVY CHAIN (protein)
Unique Ligands	ADP, MG, VO4

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1MU9 \| pdb_00001mu9	Download File View File

Crystal Structure of a Human Tyrosyl-DNA Phosphodiesterase (Tdp1)-Vanadate Complex

Davies, D.R., Interthal, H., Champoux, J.J., Hol, W.G.J.

(2002) J Mol Biology 324: 917-932

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	Tyrosyl-DNA Phosphodiesterase (protein)
Unique Ligands	GOL, VO4

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1NOP \| pdb_00001nop	Download File View File

Crystal structure of human tyrosyl-DNA phosphodiesterase (Tdp1) in complex with vanadate, DNA and a human topoisomerase I-derived peptide

Davies, D.R., Interthal, H., Champoux, J.J., Hol, W.G.J.

(2003) Chem Biol 10: 139-147

Released	2003-03-11
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	topoisomerase I-derived peptide (protein) tyrosyl-DNA phosphodiesterase 1 (protein) 5'-D(APGPAPGPTPT)-3' (nucleic acid)
Unique Ligands	VO4

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1QI9 \| pdb_00001qi9	Download File View File

X-RAY SIRAS STRUCTURE DETERMINATION OF A VANADIUM-DEPENDENT HALOPEROXIDASE FROM ASCOPHYLLUM NODOSUM AT 2.0 A RESOLUTION

Weyand, M., Hecht, H.-J., Kiess, M., Liaud, M.F., Vilter, H., Schomburg, D.

(1999) J Mol Biology 293: 595-611

Released	2000-06-10
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Ascophyllum nodosum
Macromolecule	Vanadium-dependent bromoperoxidase (protein)
Unique Ligands	VO4

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1QVI \| pdb_00001qvi	Download File View File

Crystal structure of scallop myosin S1 in the pre-power stroke state to 2.6 Angstrom resolution: flexibility and function in the head

Gourinath, S., Himmel, D.M., Brown, J.H., Reshetnikova, L., Szent-Gyrgyi, A.G., Cohen, C.

(2003) Structure 11: 1621-1627

Released	2003-12-16
Method	X-RAY DIFFRACTION 2.54 Å
Organisms	Argopecten irradians
Macromolecule	Myosin essential light chain, striated adductor muscle (protein) Myosin heavy chain, striated muscle (protein) Myosin regulatory light chain, striated adductor muscle (protein)
Unique Ligands	ADP, CA, MG, VO4

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1RFF \| pdb_00001rff	Download File View File

Crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, octapeptide KLNYYDPR, and tetranucleotide AGTT.

Davies, D.R., Interthal, H., Champoux, J.J., Hol, W.G.

(2004) J Med Chem 47: 829-837

Released	2004-03-02
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Topoisomerase I-Derived Peptide (protein) Tyrosyl-DNA phosphodiesterase 1 (protein) 5'-D(APGPTPT)-3' (nucleic acid)
Unique Ligands	SPM, VO4

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1RFI \| pdb_00001rfi	Download File View File

Crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, pentapeptide KLNYK, and tetranucleotide AGTC

Davies, D.R., Interthal, H., Champoux, J.J., Hol, W.G.

(2004) J Med Chem 47: 829-837

Released	2004-03-02
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Topoisomerase I-Derived Peptide (protein) Tyrosyl-DNA phosphodiesterase 1 (protein) 5'-D(APGPTPC)-3' (nucleic acid)
Unique Ligands	SPM, VO4

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1RG1 \| pdb_00001rg1	Download File View File

Crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, octopamine, and tetranucleotide AGTT

Davies, D.R., Interthal, H., Champoux, J.J., Hol, W.G.

(2004) J Med Chem 47: 829-837

Released	2004-03-02
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Tyrosyl-DNA phosphodiesterase 1 (protein) 5'-D(APGPTPT)-3' (nucleic acid)
Unique Ligands	OTS, SPM, VO4

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1RG2 \| pdb_00001rg2	Download File View File

Crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, octopamine, and tetranucleotide AGTA

Davies, D.R., Interthal, H., Champoux, J.J., Hol, W.G.

(2004) J Med Chem 47: 829-837

Released	2004-03-02
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Tyrosyl-DNA phosphodiesterase 1 (protein) 5'-D(APGPTPA)-3' (nucleic acid)
Unique Ligands	OTR, OTS, SPM, VO4

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1RGT \| pdb_00001rgt	Download File View File

Crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, octopamine, and tetranucleotide AGTC

Davies, D.R., Interthal, H., Champoux, J.J., Hol, W.G.

(2004) J Med Chem 47: 829-837

Released	2004-03-02
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Tyrosyl-DNA phosphodiesterase 1 (protein) 5'-D(APGPTPC)-3' (nucleic acid)
Unique Ligands	OTR, OTS, SPM, VO4

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1RGU \| pdb_00001rgu	Download File View File

The crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, octopamine, and tetranucleotide AGTG

Davies, D.R., Interthal, H., Champoux, J.J., Hol, W.G.

(2004) J Med Chem 47: 829-837

Released	2004-03-02
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Homo sapiens
Macromolecule	Tyrosyl-DNA phosphodiesterase 1 (protein) 5'-D(APGPTPG)-3' (nucleic acid)
Unique Ligands	OTS, SPM, VO4

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1RH0 \| pdb_00001rh0	Download File View File

Crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, octopamine and trinucleotide GTT

Davies, D.R., Interthal, H., Champoux, J.J., Hol, W.G.

(2004) J Med Chem 47: 829-837

Released	2004-03-02
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Tyrosyl-DNA phosphodiesterase 1 (protein) 5'-D(GPTP*T)-3' (nucleic acid)
Unique Ligands	OTS, SPM, VO4

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1RPT \| pdb_00001rpt	Download File View File

CRYSTAL STRUCTURES OF RAT ACID PHOSPHATASE COMPLEXED WITH THE TRANSITIONS STATE ANALOGS VANADATE AND MOLYBDATE: IMPLICATIONS FOR THE REACTION MECHANISM

Lindqvist, Y., Schneider, G.

(1994) Eur J Biochem 221: 139-142

Released	1994-05-31
Method	X-RAY DIFFRACTION 3 Å
Organisms	Rattus norvegicus
Macromolecule	PROSTATIC ACID PHOSPHATASE (protein)
Unique Ligands	NAG, VO4
Unique branched monosaccharides	BMA, NAG

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1UZI \| pdb_00001uzi	Download File View File

C3 EXOENZYME FROM CLOSTRIDIUM BOTULINUM, TETRAGONAL FORM

Evans, H.R., Holloway, D.E., Sutton, J.M., Ayriss, J., Shone, C.C., Acharya, K.R.

(2004) Acta Crystallogr D Biol Crystallogr 60: 1502

Released	2004-07-29
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Clostridium botulinum
Macromolecule	MONO-ADP-RIBOSYLTRANSFERASE C3 (protein)
Unique Ligands	GOL, V4O, VO4

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1VFZ \| pdb_00001vfz	Download File View File

Crystal Structure of the Kif1A Motor Domain Complexed With ADP-Mg-VO4

Nitta, R., Kikkawa, M., Okada, Y., Hirokawa, N.

(2004) Science 305: 678-683

Released	2004-08-10
Method	X-RAY DIFFRACTION 2.24 Å
Organisms	Mus musculus
Macromolecule	PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C and A HIS TAG (protein)
Unique Ligands	ADP, MG, VO4

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1VNC \| pdb_00001vnc	Download File View File

CHLOROPEROXIDASE FROM THE FUNGUS CURVULARIA INAEQUALIS

Messerschmidt, A., Wever, R.

(1996) Proc Natl Acad Sci U S A 93: 392-396

Released	1996-11-08
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Curvularia inaequalis
Macromolecule	VANADIUM-CONTAINING CHLOROPEROXIDASE (protein)
Unique Ligands	AZI, VO4