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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: BIRD Name HAS EXACT PHRASE "=Lewis Y antigen, beta anomer"

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Streptococcus mitis (2)
	Streptococcus pneumoniae TIGR4 (2)
	Homo sapiens (1)
	Mus musculus (1)
	Norovirus Hu/GI.7/TCH-060/USA/2003 (1)
	Norwalk virus (1)
	Streptococcus pneumoniae SP3-BS71 (1)
	Vibrio cholerae O1 (1)

Taxonomy

	Bacteria (6)
	Eukaryota (2)
	Riboviria (2)

Experimental Method

X-RAY DIFFRACTION (10)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (4)
	2.0 - 2.5 (2)
	2.5 - 3.0 (2)

Release Date

	1995 - 1999 (2)
	2005 - 2009 (3)
	2010 - 2014 (4)
	2015 - 2019 (1)

Symmetry Type

	Asymmetric (8)
	Cyclic (3)

SCOP Classification

	All beta proteins (10)
	Artifacts (2)
	Alpha and beta proteins (a/b) (2)

AllSelected

1 to 10 of 10 Structures

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1CLY	Download File View File

IGG FAB (HUMAN IGG1, KAPPA) CHIMERIC FRAGMENT (CBR96) COMPLEXED WITH LEWIS Y NONOATE METHYL ESTER

Sheriff, S., Bajorath, J.

(1995) Nat Struct Biol 2: 466-471

Released	1996-08-01
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	IGG FAB (HUMAN IGG1, KAPPA) (protein)
Unique Ligands	NON
Unique branched monosaccharides	FUC, GAL, NAG

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1CLZ	Download File View File

IGG FAB (IGG3, KAPPA) FRAGMENT (MBR96) COMPLEXED WITH LEWIS Y NONOATE METHYL ESTER

Sheriff, S., Bajorath, J.

(1995) Nat Struct Biol 2: 466-471

Released	1996-08-01
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mus musculus
Macromolecule	IGG FAB (IGG3, KAPPA) (protein)
Unique Ligands	NON
Unique branched monosaccharides	FUC, GAL, NAG

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2J1T	Download File View File

Structure of a Streptococcus pneumoniae fucose binding module in complex with the Lewis Y antigen

Boraston, A.B., Wang, D., Burke, R.D.

(2006) J Biol Chem 281: 35263

Released	2006-09-06
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	FUCOLECTIN-RELATED PROTEIN (protein)
Unique Ligands	CA
Unique branched monosaccharides	FUC, GAL, NAG

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2WMG	Download File View File

Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae TIGR4 (Sp4GH98) in complex with the LewisY pentasaccharide blood group antigen.

Higgins, M.A., Whitworth, G.E., El Warry, N., Randriantsoa, M., Samain, E., Burke, R.D., Vocadlo, D.J., Boraston, A.B.

(2009) J Biol Chem 284: 26161

Released	2009-07-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	FUCOLECTIN-RELATED PROTEIN (protein)
Unique branched monosaccharides	FUC, GAL, NAG

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3LEG	Download File View File

Lectin Domain of Lectinolysin complexed with Lewis Y Antigen

Feil, S.C.

(2012) Structure 20: 248-258

Released	2010-12-29
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Streptococcus mitis
Macromolecule	Platelet aggregation factor Sm-hPAF (protein)
Unique Ligands	CA, NI
Unique branched monosaccharides	FUC, GAL, NAG

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3PA2	Download File View File

Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with HBGA type Ley

Hansman, G.S., Biertumpfel, C., Chen, L., Georgiev, I., McLellan, J.S., Katayama, K., Kwong, P.D.

(2011) J Virol 85: 6687-6701

Released	2011-05-11
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Norwalk virus
Macromolecule	Capsid protein (protein)
Unique Ligands	EDO, IMD
Unique branched monosaccharides	FUC, GAL, NAG

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4GWI	Download File View File

His 62 mutant of the lectin binding domain of lectinolysin complexed with Lewis y

Feil, S.C.

(2012) Front Immunol 3: 330-330

Released	2012-11-21
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Streptococcus mitis
Macromolecule	Platelet aggregation factor Sm-hPAF (protein)
Unique Ligands	CA, GOL, MG
Unique branched monosaccharides	FUC, GAL, NAG

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4P25	Download File View File

Structure of the P domain from a GI.7 Norovirus variant in complex with LeY HBGA.

Shanker, S., Czako, R., Sankaran, B., Atmar, R., Estes, M., Prasad, B.V.V.

(2014) J Virol 88: 6168-6180

Released	2014-04-02
Method	X-RAY DIFFRACTION 1.4991 Å
Organisms	Norovirus Hu/GI.7/TCH-060/USA/2003
Macromolecule	Major capsid protein (protein)
Unique branched monosaccharides	FUC, GAL, NAG

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5ELC	Download File View File

Cholera toxin El Tor B-pentamer in complex with Lewis-y

Heggelund, J.E., Burschowsky, D., Krengel, U.

(2016) PLoS Pathog 12: e1005567-e1005567

Released	2016-03-30
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Vibrio cholerae O1
Macromolecule	Cholera enterotoxin subunit B (protein)
Unique Ligands	BCN, CA, FUC
Unique branched monosaccharides	FUC, GAL, NAG, NDG

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2WMK	Download File View File

Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 (Sp3GH98) in complex with the A-LewisY pentasaccharide blood group antigen.

Higgins, M.A., Whitworth, G.E., El Warry, N., Randriantsoa, M., Samain, E., Burke, R.D., Vocadlo, D.J., Boraston, A.B.

(2009) J Biol Chem 284: 26161

Released	2009-07-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptococcus pneumoniae SP3-BS71
Macromolecule	FUCOLECTIN-RELATED PROTEIN (protein)
Unique branched monosaccharides	A2G, FUC, GAL, NAG

1 to 10 of 10 Structures

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