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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

QUERY: Citation Author = "de la Pena, A.T."

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This query matches 34 Structures.

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4NUG	Download File View File

Crystal structure of HIV-1 broadly neutralizing antibody PGT151

Blattner, C., Wilson, I.A.

(2014) Immunity 40: 669-680

Released	2014-05-14
Method	X-RAY DIFFRACTION 1.8617 Å
Organisms	Homo sapiens
Macromolecule	PGT151 heavy chain (protein) PGT151 light chain (protein)
Unique Ligands	P6G

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4NUJ	Download File View File

Crystal structure of HIV-1 broadly neutralizing antibody PGT152

Blattner, C., Wilson, I.A.

(2014) Immunity 40: 669-680

Released	2014-05-14
Method	X-RAY DIFFRACTION 1.827 Å
Organisms	Homo sapiens
Macromolecule	PGT152 heavy chain (protein) PGT152 light chain (protein)

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4TOY	Download File View File

Structure of 35O22 Fab, a HIV-1 neutralizing antibody

Pancera, M., Kwong, P.D.

(2014) Nature 515: 138-142

Released	2014-09-03
Method	X-RAY DIFFRACTION 1.551 Å
Organisms	Homo sapiens
Macromolecule	35O22 Fab Heavy chain (protein) 35O22 Fab Light chain (protein)

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6IEQ	Download File View File

Crystal Structure of HIV-1 Env ConM SOSIP.v7 in Complex with bNAb PGT124 and 35O22

Han, B.W., Wilson, I.A.

(2019) Nat Commun 10: 2355-2355

Released	2019-05-22
Method	X-RAY DIFFRACTION 3.9 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Unique protein chains: 6
Unique Ligands	MAN, NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L7T	Download File View File

BG505 SOSIP reconstructed from a designed nanoparticle, BG505 SOSIP-T33-31 (Component A)

Antanasijevic, A., Cannac, F., Sewall, L.M., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	BG505 SOSIP.v5.2(7S) - gp120 (protein) BG505 SOSIP.v5.2(7S) - gp41 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L7U	Download File View File

BG505 SOSIP reconstructed from a designed nanoparticle, BG505 SOSIP-T33-31 (Component B)

Antanasijevic, A., Froes Rocha, R., Sewall, L.M., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	BG505 SOSIP.v5.2(7S) - gp120 (protein) BG505 SOSIP.v5.2(7S) - gp41 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L85	Download File View File

Designed tetrahedral nanoparticle T33-31 presenting BG505 SOSIP trimers

Antanasijevic, A., Sewall, L.M., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	BG505 SOSIP-T33-31A (protein) BG505 SOSIP-T33-31B (protein)

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7L86	Download File View File

BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-1 from animal Rh.32034 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP MD39 - gp120 (protein) BG505 SOSIP MD39 - gp41 (protein) Rh.32034 pAbC-1 - Heavy Chain (protein) Rh.32034 pAbC-1 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L87	Download File View File

BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-2 from animal Rh.32034 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Yang, Y.R., Perrett, H.R., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3.6 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP MD39 - gp120 (protein) BG505 SOSIP MD39 - gp41 (protein) Rh.32034 pAbC-2 - Heavy Chain (protein) Rh.32034 pAbC-2 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L88	Download File View File

BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-3 from animal Rh.32034 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Cannac, F., Perrett, H.R., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3.6 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP MD39 - gp120 (protein) BG505 SOSIP MD39 - gp41 (protein) Rh.32034 pAbC-3 - Heavy Chain (protein) Rh.32034 pAbC-3 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L89	Download File View File

BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-4 from animal Rh.32034 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Rantalainen, K., Perrett, H.R., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP MD39 - gp120 (protein) BG505 SOSIP MD39 - gp41 (protein) Rh.32034 pAbC-4 - Heavy Chain (protein) Rh.32034 pAbC-4 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8A	Download File View File

BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-1 from animal Rh.33104 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Torrents de la Pena, A., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP MD39 - gp120 (protein) BG505 SOSIP MD39 - gp41 (protein) Rh.33104 pAbC-1 - Heavy Chain (protein) Rh.33104 pAbC-1 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8B	Download File View File

BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-2 from animal Rh.33104 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Yang, Y.R., Perrett, H.R., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP MD39 - gp120 (protein) BG505 SOSIP MD39 - gp41 (protein) Rh.33104 pAbC-2 - Heavy Chain (protein) Rh.33104 pAbC-2 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8C	Download File View File

BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-3 from animal Rh.33104 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Perrett, H.R., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP MD39 - gp120 (protein) BG505 SOSIP MD39 - gp41 (protein) Rh.33104 pAbC-3 - Heavy Chain (protein) Rh.33104 pAbC-3 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8D	Download File View File

BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-4 from animal Rh.33104 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 4.6 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP MD39 - gp120 (protein) BG505 SOSIP MD39 - gp41 (protein) Rh.33104 pAbC-3 - Heavy Chain (protein) Rh.33104 pAbC-3 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8E	Download File View File

BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-1 from animal Rh.33172 (Wk38 time point)

Antanasijevic, A., Sewall, L.M., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	Envelope glycoprotein gp160 (protein) Rh.33172 pAbC-1 Heavy Chain (protein) Rh.33172 pAbC-1 Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8F	Download File View File

BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-2 from animal Rh.33172 (Wk38 time point)

Antanasijevic, A., Sewall, L.M., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3.66 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	Envelope glycoprotein gp160 (protein) Rh.33172 pAbC-2 Heavy Chain (protein) Rh.33172 pAbC-2 Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8G	Download File View File

BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-3 from animal Rh.33172 (Wk38 time point)

Antanasijevic, A., Sewall, L.M., Rantalainen, K., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	Envelope glycoprotein gp160 (protein) Rh.33172 pAbC-3 Heavy Chain (protein) Rh.33172 pAbC-3 Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8S	Download File View File

BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-4 from animal Rh.33172 (Wk38 time point)

Antanasijevic, A., Sewall, L.M., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP.v5.2(7S) - gp120 (protein) BG505 SOSIP.v5.2(7S) - gp41 (protein) Rh.33172 pAbC-4 - Heavy Chain (protein) Rh.33172 pAbC-4 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8T	Download File View File

BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-1 from animal Rh.33311 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP.v5.2 N241/N289 - gp120 (protein) BG505 SOSIP.v5.2 N241/N289 - gp41 (protein) Rh.33311 pAbC-1 - Heavy Chain (protein) Rh.33311 pAbC-1 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8U	Download File View File

BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-2 from animal Rh.33311 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Rantalainen, K., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 4.5 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP.v5.2 N241/N289 - gp120 (protein) BG505 SOSIP.v5.2 N241/N289 - gp41 (protein) Rh.33311 pAbC-2 - Heavy Chain (protein) Rh.33311 pAbC-2 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8W	Download File View File

BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-3 from animal Rh.33311 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP.v5.2 N241/N289 - gp120 (protein) BG505 SOSIP.v5.2 N241/N289 - gp41 (protein) Rh.33311 pAbC-3 - Heavy Chain (protein) Rh.33311 pAbC-3 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8X	Download File View File

BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-4 from animal Rh.33311 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Yang, Y.R., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP.v5.2 N241/N289 - gp120 (protein) BG505 SOSIP.v5.2 N241/N289 - gp41 (protein) Rh.33311 pAbC-4 - Heavy Chain (protein) Rh.33311 pAbC-4 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8Y	Download File View File

BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-5 from animal Rh.33311 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Cannac, F., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP.v5.2 N241/N289 - gp120 (protein) BG505 SOSIP.v5.2 N241/N289 - gp41 (protein) Rh.33311 pAbC-5 - Heavy Chain (protein) Rh.33311 pAbC-5 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7L8Z	Download File View File

BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-7 from animal Rh.33311 (Wk26 time point)

Antanasijevic, A., Sewall, L.M., Perrett, H.R., Ward, A.B.

(2021) Nat Commun 12: 4817-4817

Released	2021-08-04
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	BG505 SOSIP.v5.2 N241/N289 - gp120 (protein) BG505 SOSIP.v5.2 N241/N289 - gp41 (protein) Rh.33311 pAbC-7 - Heavy Chain (protein) Rh.33311 pAbC-7 - Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG