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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Zhao, R."

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Search Summary

This query matches 123 Structures.

Refinements

Structure Determination Methodology

experimental (123)

Scientific Name of Source Organism

	Homo sapiens (48)
	Severe acute respiratory syndrome coronavirus 2 (7)
	Mus musculus (6)
	Spinacia oleracea (6)
	Escherichia coli (5)
	Saccharomyces cerevisiae (5)
	Saccharomyces cerevisiae S288C (5)
	Betapolyomavirus macacae (4)
	Caenorhabditis elegans (4)
	Drosophila melanogaster (4)

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Taxonomy

	Eukaryota (88)
	Riboviria (24)
	Bacteria (12)
	Monodnaviria (8)
	Varidnaviria (3)
	Duplodnaviria (2)
	other sequences (2)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (93)
	ELECTRON MICROSCOPY (26)
	SOLUTION NMR (4)

Polymer Entity Type

	Protein (123)
	RNA (8)
	DNA (3)

Refinement Resolution (Å)

	1.0 - 1.5 (13)
	1.5 - 2.0 (20)
	2.0 - 2.5 (19)
	2.5 - 3.0 (44)
	3.0 - 3.5 (18)
	3.5 - 4.0 (4)
	> 4.5 (1)

Release Date

	1995 - 1999 (10)
	2000 - 2004 (21)
	2005 - 2009 (14)
	2010 - 2014 (19)
	2015 - 2019 (17)
	2020 - 2024 (38)
	2025 - 2029 (4)

Enzyme Classification Name

	Hydrolases (29)
	Isomerases (9)
	Transferases (8)
	Oxidoreductases (4)

Membrane Protein Annotation

	PDBTM (7)
	MemProtMD (4)

Symmetry Type

	Asymmetric (83)
	Cyclic (29)
	Icosahedral (8)
	Dihedral (5)

SCOP Classification

	All beta proteins (26)
	Alpha and beta proteins (a/b) (15)
	Artifacts (14)
	Alpha and beta proteins (a+b) (15)
	All alpha proteins (8)
	Low resolution protein structures (1)
	Small proteins (3)
	Coiled coil proteins (1)

AllSelected

1 to 25 of 123 Structures

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1AYM	Download File View File

HUMAN RHINOVIRUS 16 COAT PROTEIN AT HIGH RESOLUTION

Hadfield, A.T., Rossmann, M.G.

(1997) Structure 5: 427-441

Released	1998-01-21
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Human rhinovirus sp.
Macromolecule	HUMAN RHINOVIRUS 16 COAT PROTEIN (protein)
Unique Ligands	DAO, MYR, ZN

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1AYN	Download File View File

HUMAN RHINOVIRUS 16 COAT PROTEIN

Hadfield, A.T., Oliveira, M.A., Zhao, R., Rossmann, M.G.

(1993) Structure 1: 51-68

Released	1998-01-21
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Human rhinovirus sp.
Macromolecule	HUMAN RHINOVIRUS 16 COAT PROTEIN (protein)
Unique Ligands	DAO, MYR, ZN

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1B0G	Download File View File

CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A2.1)/BETA 2-MICROGLOBULIN/PEPTIDE P1049 COMPLEX

Zhao, R., Collins, E.J.

(1999) J Exp Med 189: 359-370

Released	1998-11-18
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	BETA 2-MICROGLOBULIN (protein) CLASS I HISTOCOMPATIBILITY ANTIGEN (protein) PEPTIDE P1049 (ALWGFFPVL) (protein)

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1BZ9	Download File View File

CRYSTAL STRUCTURE OF MURINE CLASS I MHC H2-DB COMPLEXED WITH A SYNTHETIC PEPTIDE P1027

Zhao, R., Collins, E.J.

(1999) J Exp Med 189: 359-370

Released	1999-05-24
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mus musculus
Macromolecule	PROTEIN (CLASS I HISTOCOMPATIBILITY ANTIGEN) (protein) PROTEIN (PEPTIDE P1027 (FAPGVFPYM)) (protein)

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1C8M	Download File View File

REFINED CRYSTAL STRUCTURE OF HUMAN RHINOVIRUS 16 COMPLEXED WITH VP63843 (PLECONARIL), AN ANTI-PICORNAVIRAL DRUG CURRENTLY IN CLINICAL TRIALS

Chakravarty, S., Bator, C.M., Pevear, D.C., Diana, G.D., Rossmann, M.G.

To be published

Released	2000-11-22
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	rhinovirus A16
Macromolecule	HUMAN RHINOVIRUS 16 COAT PROTEIN (protein)
Unique Ligands	W11, ZN

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1D3E	Download File View File

CRYO-EM STRUCTURE OF HUMAN RHINOVIRUS 16 (HRV16) COMPLEXED WITH A TWO-DOMAIN FRAGMENT OF ITS CELLULAR RECEPTOR, INTERCELLULAR ADHESION MOLECULE-1 (D1D2-ICAM-1). IMPLICATIONS FOR VIRUS-RECEPTOR INTERACTIONS. ALPHA CARBONS ONLY

Bella, J., Rossmann, M.G.

(1999) EMBO J 18: 6249-6259

Released	2000-01-19
Method	ELECTRON MICROSCOPY 28 Å
Organisms	Homo sapiens Human rhinovirus sp.
Macromolecule	PROTEIN (INTERCELLULAR ADHESION MOLECULE-1) (protein) PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP1) (protein) PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP2) (protein) PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP3) (protein) PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP4) (protein)

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1D4Z	Download File View File

CRYSTAL STRUCTURE OF CHEY-95IV, A HYPERACTIVE CHEY MUTANT

Schuster, M., Zhao, R., Bourret, R.B., Collins, E.J.

(2000) J Biol Chem 275: 19752-19758

Released	1999-10-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli
Macromolecule	CHEMOTAXIS PROTEIN CHEY (protein)
Unique Ligands	SO4

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1FFN	Download File View File

CRYSTAL STRUCTURE OF MURINE CLASS I H-2DB COMPLEXED WITH PEPTIDE GP33(C9M)

Wang, B., Sharma, A., Maile, R., Saad, M., Collins, E.J., Frelinger, J.A.

(2002) J Immunol 169: 3137-3145

Released	2002-12-11
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mus musculus
Macromolecule	BETA-2 MICROGLOBULIN, BETA CHAIN (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN (protein) SYNTHETIC PEPTIDE WITH SEQUENCE LYS-ALA-VAL-TYR-ASN-PHE-ALA-THR-MET (protein)

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1FFO	Download File View File

CRYSTAL STRUCTURE OF MURINE CLASS I H-2DB COMPLEXED WITH SYNTHETIC PEPTIDE GP33 (C9M/K1A)

Wang, B., Sharma, A., Maile, R., Saad, M., Collins, E.J., Frelinger, J.A.

(2002) J Immunol 169: 3137-3145

Released	2002-12-11
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Mus musculus
Macromolecule	BETA-2 MICROGLOBULIN BETA CHAIN (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B, ALPHA CHAIN (protein) PEPTIDE WITH SEQUENCE ALA-ALA-VAL-TYR-ASN-PHE-ALA-THR-MET (protein)

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1FFP	Download File View File

CRYSTAL STRUCTURE OF MURINE CLASS I H-2DB COMPLEXED WITH PEPTIDE GP33 (C9M/K1S)

Wang, B., Sharma, A., Maile, R., Saad, M., Collins, E.J., Frelinger, J.A.

(2002) J Immunol 169: 3137-3145

Released	2002-12-11
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Mus musculus
Macromolecule	BETA-2 MICROGLOBULIN BETA CHAIN (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B, ALPHA CHAIN (protein) SYNTHETIC PEPTIDE WITH SEQUENCE SER-ALA-VAL-TYR-ASN-PHE-ALA-THR-MET (protein)

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1GGW	Download File View File

CDC4P FROM SCHIZOSACCHAROMYCES POMBE

Slupsky, C.M., Hemmingsen, S.M., McIntosh, L.P.

(2001) J Biol Chem 276: 5943-5951

Released	2001-03-21
Method	SOLUTION NMR
Organisms	Schizosaccharomyces pombe
Macromolecule	PROTEIN (CDC4P) (protein)

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1I7R	Download File View File

CRYSTAL STRUCTURE OF CLASS I MHC A2 IN COMPLEX WITH PEPTIDE P1058

Busslep, J., Zhao, R., Loftus, D., Appella, E., Collins, E.J.

(2001) J Biol Chem 276: 47320-47328

Released	2001-10-24
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	9 RESIDUE PEPTIDE (protein) BETA-2-MICROGLOBULIN (protein) HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN (protein)

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1I7T	Download File View File

CRYSTAL STRUCTURE OF CLASS I MHC A2 IN COMPLEX WITH PEPTIDE P1049-5V

Busslep, J., Zhao, R., Loftus, D., Appella, E., Collins, E.J.

(2001) J Biol Chem 276: 47320-47328

Released	2001-10-24
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	9 RESIDUE PEPTIDE (protein) BETA-2-MICROGLOBULIN (protein) HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN (protein)

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1I7U	Download File View File

CRYSTAL STRUCTURE OF CLASS I MHC A2 IN COMPLEX WITH PEPTIDE P1049-6V

Busslep, J., Zhao, R., Loftus, D., Appella, E., Collins, E.J.

(2001) J Biol Chem 276: 47320-47328

Released	2001-10-24
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	9 RESIDUE PEPTIDE (protein) BETA-2-MICROGLOBULIN (protein) HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN (protein)

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1KMI	Download File View File

CRYSTAL STRUCTURE OF AN E.COLI CHEMOTAXIS PROTEIN, CHEZ

Zhao, R., Collins, E.J., Bourret, R.B., Silversmith, R.E.

(2002) Nat Struct Biol 9: 570-575

Released	2002-07-24
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Escherichia coli
Macromolecule	Chemotaxis protein cheY (protein) Chemotaxis protein cheZ (protein)
Unique Ligands	BCN, BEF, MG

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1MIH	Download File View File

A ROLE FOR CHEY GLU 89 IN CHEZ-MEDIATED DEPHOSPHORYLATION OF THE E. COLI CHEMOTAXIS RESPONSE REGULATOR CHEY

Silversmith, R.E., Guanga, G.P., Betts, L., Chu, C., Zhao, R., Bourret, R.B.

(2003) J Bacteriol 185: 1495-1502

Released	2003-04-08
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Escherichia coli
Macromolecule	Chemotaxis protein cheY (protein)
Unique Ligands	BEF, MN, SO4

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1N25	Download File View File

Crystal structure of the SV40 Large T antigen helicase domain

Li, D., Zhao, R., Lilyestrom, W., Gai, D., Zhang, R., DeCaprio, J.A., Fanning, E., Jochimiak, A., Szakonyi, G., Chen, X.S.

(2003) Nature 423: 512-518

Released	2003-06-03
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Betapolyomavirus macacae
Macromolecule	Large T Antigen (protein)
Unique Ligands	ZN

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1OOF	Download File View File

Complex of Drosophila odorant binding protein LUSH with ethanol

Kruse, S.W., Zhao, R., Smith, D.P., Jones, D.N.M.

(2003) Nat Struct Biol 10: 694-700

Released	2003-09-02
Method	X-RAY DIFFRACTION 1.49 Å
Organisms	Drosophila melanogaster
Macromolecule	odorant binding protein LUSH (protein)
Unique Ligands	ACT, EOH

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1OOG	Download File View File

Complex of Drosophila odorant binding protein LUSH with propanol

Kruse, S.W., Zhao, R., Smith, D.P., Jones, D.N.M.

(2003) Nat Struct Biol 10: 694-700

Released	2003-09-02
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Drosophila melanogaster
Macromolecule	odorant binding protein LUSH (protein)
Unique Ligands	ACT, POL

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1OOH	Download File View File

Complex of Drosophila odorant binding protein LUSH with butanol

Kruse, S.W., Zhao, R., Smith, D.P., Jones, D.N.M.

(2003) Nat Struct Biol 10: 694-700

Released	2003-09-02
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Drosophila melanogaster
Macromolecule	odorant binding protein LUSH (protein)
Unique Ligands	1BO, ACT

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1OOI	Download File View File

Crystal structure of LUSH from Drosophila melanogaster at pH 6.5

Kruse, S.W., Zhao, R., Smith, D.P., Jones, D.N.M.

(2003) Nat Struct Biol 10: 694-700

Released	2003-09-02
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Drosophila melanogaster
Macromolecule	odorant binding protein LUSH (protein)

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1QJU	Download File View File

HUMAN RHINOVIRUS 16 COAT PROTEIN IN COMPLEX WITH ANTIVIRAL COMPOUND VP61209

Hadfield, A.T., Minor, I., Diana, G.D., Rossmann, M.G.

(1999) Proc Natl Acad Sci U S A 96: 14730

Released	1999-07-20
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	rhinovirus A16
Macromolecule	PROTEIN VP1 (protein) PROTEIN VP2 (protein) PROTEIN VP3 (protein) PROTEIN VP4 (protein)
Unique Ligands	MYR, W01, ZN

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1QJX	Download File View File

HUMAN RHINOVIRUS 16 COAT PROTEIN IN COMPLEX WITH ANTIVIRAL COMPOUND WIN68934

Hadfield, A.T., Diana, G.D., Rossmann, M.G.

(1999) Proc Natl Acad Sci U S A 96: 14730

Released	1999-07-20
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	rhinovirus A16
Macromolecule	PROTEIN VP1 (protein) PROTEIN VP2 (protein) PROTEIN VP3 (protein) PROTEIN VP4 (protein)
Unique Ligands	MYR, W02, ZN

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1QJY	Download File View File

HUMAN RHINOVIRUS 16 COAT PROTEIN IN COMPLEX WITH ANTIVIRAL COMPOUND VP65099

Hadfield, A.T., Diana, G.D., Rossmann, M.G.

(1999) Proc Natl Acad Sci U S A 96: 14730

Released	1999-07-20
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	rhinovirus A16
Macromolecule	PROTEIN VP1 (protein) PROTEIN VP2 (protein) PROTEIN VP3 (protein) PROTEIN VP4 (protein)
Unique Ligands	MYR, W03, ZN

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1RHI	Download File View File

HUMAN RHINOVIRUS 3 COAT PROTEIN

Zhao, R., Rossmann, M.G.

(1996) Structure 4: 1205-1220

Released	1997-03-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	rhinovirus B3
Macromolecule	HUMAN RHINOVIRUS 3 COAT PROTEIN (protein)
Unique Ligands	CA

1 to 25 of 123 Structures

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