RCSB PDB: Search

1AU0 \| pdb_00001au0	Download File View File

CRYSTAL STRUCTURE OF THE CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT SYMMETRIC DIACYLAMINOMETHYL KETONE INHIBITOR

Zhao, B., Smith, W.W., Janson, C.A., Abdel-Meguid, S.S.

(1997) J Am Chem Soc 119: 11351-11352

Released	1998-10-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	CATHEPSIN K (protein)
Unique Ligands	SDK

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1AU2 \| pdb_00001au2	Download File View File

CRYSTAL STRUCTURE OF THE CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT PROPANONE INHIBITOR

Zhao, B., Smith, W.W., Janson, C.A., Abdel-Meguid, S.S.

(1997) J Am Chem Soc 119: 11351-11352

Released	1998-10-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	CATHEPSIN K (protein)
Unique Ligands	POS

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1AU3 \| pdb_00001au3	Download File View File

CRYSTAL STRUCTURE OF THE CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT PYRROLIDINONE INHIBITOR

Zhao, B., Smith, W.W., Janson, C.A., Abdel-Meguid, S.S.

(1998) J Med Chem 41: 3563-3567

Released	1998-10-14
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	CATHEPSIN K (protein)
Unique Ligands	PCM

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1AU4 \| pdb_00001au4	Download File View File

CRYSTAL STRUCTURE OF THE CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT PYRROLIDINONE INHIBITOR

Zhao, B., Smith, W.W., Janson, C.A., Abdel-Meguid, S.S.

(1998) J Med Chem 41: 3563-3567

Released	1998-10-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	CATHEPSIN K (protein)
Unique Ligands	INP

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1BGO \| pdb_00001bgo	Download File View File

CRYSTAL STRUCTURE OF CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT PEPTIDOMIMETIC INHIBITOR

Desjarlais, R.L., Yamashita, D.S., Oh, H.-J., Bondinell, W.E., Uzinskas, I.N., Erhard, K.F., Allen, A.C., Haltiwanger, R.C., Zhao, B., Smith, W.W., Abdel-Meguid, S.S., D'Alessio, K., Janson, C.A., Mcqueney, M.S., Tomaszek, T.A., Levy, M.A., Veber, D.F.

(1998) J Am Chem Soc 120: 9114

Released	1999-06-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	CATHEPSIN K (protein)
Unique Ligands	I10

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1BP4 \| pdb_00001bp4	Download File View File

USE OF PAPAIN AS A MODEL FOR THE STRUCTURE-BASED DESIGN OF CATHEPSIN K INHIBITORS. CRYSTAL STRUCTURES OF TWO PAPAIN INHIBITOR COMPLEXES DEMONSTRATE BINDING TO S'-SUBSITES.

Lalonde, J.M., Zhao, B., Smith, W.W., Janson, C.A., Desjarlais, R.L., Tomaszek, T.A., Carr, T.J., Thompson, S.K., Yamashita, D.S., Veber, D.F., Abdel-Mequid, S.S.

(1998) J Med Chem 41: 4567-4576

Released	1999-08-12
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Carica papaya
Macromolecule	PAPAIN (protein)
Unique Ligands	ALD

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1BQI \| pdb_00001bqi	Download File View File

USE OF PAPAIN AS A MODEL FOR THE STRUCTURE-BASED DESIGN OF CATHEPSIN K INHIBITORS. CRYSTAL STRUCTURES OF TWO PAPAIN INHIBITOR COMPLEXES DEMONSTRATE BINDING TO S'-SUBSITES.

Lalonde, J.M., Zhao, B., Smith, W.W., Janson, C.A., Desjarlais, R.L., Tomaszek, T.A., Carr, T.J., Thompson, S.K., Yamashita, D.S., Veber, D.F., Abdel-Mequid, S.S.

(1998) J Med Chem 41: 4567-4576

Released	1999-08-16
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Carica papaya
Macromolecule	PAPAIN (protein)
Unique Ligands	SBA

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1F40 \| pdb_00001f40	Download File View File

SOLUTION STRUCTURE OF FKBP12 COMPLEXED WITH GPI-1046, A NEUROTROPHIC LIGAND

Sich, C., Improta, S., Cowley, D.J., Guenet, C., Merly, J.P., Teufel, M., Saudek, V.

(2000) Eur J Biochem 267: 5342-5354

Released	2000-11-08
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	FK506 BINDING PROTEIN (FKBP12) (protein)
Unique Ligands	GPI

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1FKG \| pdb_00001fkg	Download File View File

DESIGN, SYNTHESIS, AND KINETIC EVALUATION OF HIGH-AFFINITY FKBP LIGANDS, AND THE X-RAY CRYSTAL STRUCTURES OF THEIR COMPLEXES WITH FKBP12

Holt, D.A., Luengo, J.I., Yamashita, D.S., Oh, H.-J., Konialian, A.L., Yen, H.-K., Rozamus, L.W., Brandt, M., Bossard, M.J., Levy, M.A., Eggleston, D.S., Stout, T.J., Liang, J., Schultz, L.W., Clardy, J.

(1993) J Am Chem Soc 115: 9925-9938

Released	1994-01-31
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	FK506 BINDING PROTEIN (protein)
Unique Ligands	SB3

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1FKH \| pdb_00001fkh	Download File View File

DESIGN, SYNTHESIS, AND KINETIC EVALUATION OF HIGH-AFFINITY FKBP LIGANDS, AND THE X-RAY CRYSTAL STRUCTURES OF THEIR COMPLEXES WITH FKBP12

Holt, D.A., Luengo, J.I., Yamashita, D.S., Oh, H.-J., Konialian, A.L., Yen, H.-K., Rozamus, L.W., Brandt, M., Bossard, M.J., Levy, M.A., Eggleston, D.S., Stout, T.J., Liang, J., Schultz, L.W., Clardy, J.

(1993) J Am Chem Soc 115: 9925-9938

Released	1994-01-31
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	FK506 BINDING PROTEIN (protein)
Unique Ligands	SBX

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1FKI \| pdb_00001fki	Download File View File

DESIGN, SYNTHESIS, AND KINETIC EVALUATION OF HIGH-AFFINITY FKBP LIGANDS, AND THE X-RAY CRYSTAL STRUCTURES OF THEIR COMPLEXES WITH FKBP12

Holt, D.A., Luengo, J.I., Yamashita, D.S., Oh, H.-J., Konialian, A.L., Yen, H.-K., Rozamus, L.W., Brandt, M., Bossard, M.J., Levy, M.A., Eggleston, D.S., Stout, T.J., Liang, J., Schultz, L.W., Clardy, J.

(1993) J Am Chem Soc 115: 9925-9938

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	FK506 BINDING PROTEIN (protein)
Unique Ligands	SB1

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1NL6 \| pdb_00001nl6	Download File View File

Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With A Covalent Azepanone Inhibitor

Smith, W.W., Janson, C.A., Zhao, B.

(2001) J Med Chem 44: 1380-1395

Released	2003-01-14
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Cathepsin K (protein)
Unique Ligands	750

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1NLJ \| pdb_00001nlj	Download File View File

CRYSTAL STRUCTURE OF THE CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT AZEPANONE INHIBITOR

Smith, W.W., Janson, C.A., Zhao, B.

(2001) J Med Chem 44: 1380-1395

Released	2003-01-14
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	CATHEPSIN K (protein)
Unique Ligands	2CA

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2FTD \| pdb_00002ftd	Download File View File

Crystal structure of Cathepsin K complexed with 7-Methyl-Substituted Azepan-3-one compound

Yamashita, D.S., Baoguang, Z.

(2006) J Med Chem 49: 1597-1612

Released	2007-01-30
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Macaca mulatta
Macromolecule	Cathepsin K (protein)
Unique Ligands	ILI

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3D0E \| pdb_00003d0e	Download File View File

Crystal structure of human Akt2 in complex with GSK690693

Concha, N.O., Smallwood, A.

(2008) J Med Chem 51: 5663-5679

Released	2008-10-21
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	RAC-beta serine/threonine-protein kinase (protein)
Unique Ligands	G93

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3E87 \| pdb_00003e87	Download File View File

Crystal structures of the kinase domain of AKT2 in complex with ATP-competitive inhibitors

Concha, N.O., Elkins, P.A., Smallwood, A., Ward, P.

(2009) Bioorg Med Chem Lett 19: 1508-1511

Released	2008-10-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Glycogen synthase kinase-3 beta peptide (protein) RAC-beta serine/threonine-protein kinase (protein)
Unique Ligands	G95

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3E88 \| pdb_00003e88	Download File View File

Crystal structures of the kinase domain of AKT2 in complex with ATP-competitive inhibitors

Concha, N.O., Elkins, P.A., Smallwood, A., Ward, P.

(2009) Bioorg Med Chem Lett 19: 1508-1511

Released	2008-10-14
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Glycogen synthase kinase-3 beta peptide (protein) RAC-beta serine/threonine-protein kinase (protein)
Unique Ligands	G96

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3E8C \| pdb_00003e8c	Download File View File

Crystal structures of the kinase domain of PKA in complex with ATP-competitive inhibitors

Concha, N.O., Elkins, P.A., Smallwood, A., Ward, P.

(2009) Bioorg Med Chem Lett 19: 1508-1511

Released	2008-11-18
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bos taurus
Macromolecule	cAMP-dependent protein kinase catalytic subunit alpha (protein) cAMP-dependent protein kinase inhibitor peptide (protein)
Unique Ligands	G96

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3E8D \| pdb_00003e8d	Download File View File

Crystal structures of the kinase domain of AKT2 in complex with ATP-competitive inhibitors

Concha, N.O., Elkins, P.A., Smallwood, A., Ward, P.

(2009) Bioorg Med Chem Lett 19: 1508-1511

Released	2008-10-14
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Glycogen synthase kinase-3 beta peptide (protein) RAC-beta serine/threonine-protein kinase (protein)
Unique Ligands	G98

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3E8E \| pdb_00003e8e	Download File View File

Crystal structures of the kinase domain of PKA in complex with ATP-competitive inhibitors

Concha, N.O., Elkins, P.A., Smallwood, A., Ward, P.

(2009) Bioorg Med Chem Lett 19: 1508-1511

Released	2008-11-18
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bos taurus
Macromolecule	PKI inhibitor peptide (protein) cAMP-dependent protein kinase catalytic subunit alpha (protein)
Unique Ligands	G98

1AU0 | pdb_00001au0

CRYSTAL STRUCTURE OF THE CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT SYMMETRIC DIACYLAMINOMETHYL KETONE INHIBITOR

1AU2 | pdb_00001au2

CRYSTAL STRUCTURE OF THE CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT PROPANONE INHIBITOR

1AU3 | pdb_00001au3

CRYSTAL STRUCTURE OF THE CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT PYRROLIDINONE INHIBITOR

1AU4 | pdb_00001au4

CRYSTAL STRUCTURE OF THE CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT PYRROLIDINONE INHIBITOR

1BGO | pdb_00001bgo

CRYSTAL STRUCTURE OF CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT PEPTIDOMIMETIC INHIBITOR

1BP4 | pdb_00001bp4

USE OF PAPAIN AS A MODEL FOR THE STRUCTURE-BASED DESIGN OF CATHEPSIN K INHIBITORS. CRYSTAL STRUCTURES OF TWO PAPAIN INHIBITOR COMPLEXES DEMONSTRATE BINDING TO S'-SUBSITES.

1BQI | pdb_00001bqi

USE OF PAPAIN AS A MODEL FOR THE STRUCTURE-BASED DESIGN OF CATHEPSIN K INHIBITORS. CRYSTAL STRUCTURES OF TWO PAPAIN INHIBITOR COMPLEXES DEMONSTRATE BINDING TO S'-SUBSITES.

1F40 | pdb_00001f40

SOLUTION STRUCTURE OF FKBP12 COMPLEXED WITH GPI-1046, A NEUROTROPHIC LIGAND

1FKG | pdb_00001fkg

DESIGN, SYNTHESIS, AND KINETIC EVALUATION OF HIGH-AFFINITY FKBP LIGANDS, AND THE X-RAY CRYSTAL STRUCTURES OF THEIR COMPLEXES WITH FKBP12

1FKH | pdb_00001fkh

DESIGN, SYNTHESIS, AND KINETIC EVALUATION OF HIGH-AFFINITY FKBP LIGANDS, AND THE X-RAY CRYSTAL STRUCTURES OF THEIR COMPLEXES WITH FKBP12

1FKI | pdb_00001fki

DESIGN, SYNTHESIS, AND KINETIC EVALUATION OF HIGH-AFFINITY FKBP LIGANDS, AND THE X-RAY CRYSTAL STRUCTURES OF THEIR COMPLEXES WITH FKBP12

1NL6 | pdb_00001nl6

Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With A Covalent Azepanone Inhibitor

1NLJ | pdb_00001nlj

CRYSTAL STRUCTURE OF THE CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT AZEPANONE INHIBITOR

2FTD | pdb_00002ftd

Crystal structure of Cathepsin K complexed with 7-Methyl-Substituted Azepan-3-one compound

3D0E | pdb_00003d0e

Crystal structure of human Akt2 in complex with GSK690693

3E87 | pdb_00003e87

Crystal structures of the kinase domain of AKT2 in complex with ATP-competitive inhibitors

3E88 | pdb_00003e88

Crystal structures of the kinase domain of AKT2 in complex with ATP-competitive inhibitors

3E8C | pdb_00003e8c

Crystal structures of the kinase domain of PKA in complex with ATP-competitive inhibitors

3E8D | pdb_00003e8d

Crystal structures of the kinase domain of AKT2 in complex with ATP-competitive inhibitors

3E8E | pdb_00003e8e

Crystal structures of the kinase domain of PKA in complex with ATP-competitive inhibitors

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AU0 | pdb_00001au0

1AU2 | pdb_00001au2

1AU3 | pdb_00001au3

1AU4 | pdb_00001au4

1BGO | pdb_00001bgo

1BP4 | pdb_00001bp4

1BQI | pdb_00001bqi

1F40 | pdb_00001f40

1FKG | pdb_00001fkg

1FKH | pdb_00001fkh

1FKI | pdb_00001fki

1NL6 | pdb_00001nl6

1NLJ | pdb_00001nlj

2FTD | pdb_00002ftd

3D0E | pdb_00003d0e

3E87 | pdb_00003e87

3E88 | pdb_00003e88

3E8C | pdb_00003e8c

3E8D | pdb_00003e8d

3E8E | pdb_00003e8e