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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Strauss, A."

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Search Summary

This query matches 35 Structures.

Refinements

Structure Determination Methodology

experimental (35)

Scientific Name of Source Organism

	Mus musculus (15)
	Homo sapiens (8)
	synthetic construct (5)
	Alkalilimnicola ehrlichii MLHE-1 (3)
	Proteus mirabilis HI4320 (2)
	Ruegeria pomeroyi (2)
	Ruegeria pomeroyi DSS-3 (2)
	Alcanivorax borkumensis (1)
	Alcanivorax borkumensis SK2 (1)
	Vibrio parahaemolyticus (1)

Taxonomy

	Eukaryota (23)
	Bacteria (9)
	other sequences (5)

Experimental Method

	X-RAY DIFFRACTION (29)
	ELECTRON MICROSCOPY (5)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (35)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (1)
	2.0 - 2.5 (4)
	2.5 - 3.0 (9)
	3.0 - 3.5 (7)
	3.5 - 4.0 (10)
	4.0 - 4.5 (1)
	> 4.5 (1)

Release Date

	2010 - 2014 (7)
	2015 - 2019 (2)
	2020 - 2024 (21)
	2025 - 2029 (5)

Membrane Protein Annotation

	PDBTM (29)
	OPM (21)
	mpstruc (18)
	MemProtMD (14)

Symmetry Type

	Cyclic (26)
	Asymmetric (8)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (1)
	Artifacts (1)

AllSelected

1 to 25 of 35 Structures

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2MUZ \| pdb_00002muz	Download File View File

ssNMR structure of a designed rocker protein

Wang, T., Joh, N., Wu, Y., DeGrado, W.F., Hong, M.

(2014) Science 346: 1520-1524

Released	2014-12-24
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	designed rocker protein (protein)

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2XQ2 \| pdb_00002xq2	Download File View File

Structure of the K294A mutant of vSGLT

Watanabe, A., Choe, S., Chaptal, V., Rosenberg, J.M., Wright, E.M., Grabe, M., Abramson, J.

(2010) Nature 468: 988

Released	2010-12-08
Method	X-RAY DIFFRACTION 2.73 Å
Organisms	Vibrio parahaemolyticus
Macromolecule	SODIUM/GLUCOSE COTRANSPORTER (protein)
Unique Ligands	PEG

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4C69 \| pdb_00004c69	Download File View File

ATP binding to murine voltage-dependent anion channel 1 (mVDAC1).

Paz, A., Colletier, J.P., Abramson, J.

(2014) Nat Struct Mol Biol 21: 626

Released	2014-06-04
Method	X-RAY DIFFRACTION 2.277 Å
Organisms	Mus musculus
Macromolecule	VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 (protein)
Unique Ligands	ATP, LDA, MC3

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4MTH \| pdb_00004mth	Download File View File

Crystal structure of mature human RegIIIalpha

Derebe, M.G.

(2013) Nature 505: 103-107

Released	2013-11-27
Method	X-RAY DIFFRACTION 1.47 Å
Organisms	Homo sapiens
Macromolecule	Regenerating islet-derived protein 3-alpha 15 kDa form (protein)
Unique Ligands	ZN

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4P6J \| pdb_00004p6j	Download File View File

Crystal Structure of the Computationally Designed Transmembrane Metallotransporter with 4-bromophenylalanine in Octyl Glucoside

Joh, N.H., Acharya, R., DeGrado, W.F.

(2014) Science 346: 1520-1524

Released	2014-12-24
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	synthetic construct
Macromolecule	Computationally Designed Transporter of Zn(II) and Proton (protein)
Unique Ligands	SO4

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4P6K \| pdb_00004p6k	Download File View File

Crystal Structure of the Computationally Designed Transmembrane Metallotransporter with 4-bromophenylalanine in Lipidic Cubic Phase

Joh, N.H., Acharya, R., DeGrado, W.F.

(2014) Science 346: 1520-1524

Released	2014-12-24
Method	X-RAY DIFFRACTION 2.704 Å
Organisms	synthetic construct
Macromolecule	Computationally Designed Transporter of Zn(II) and Proton (protein)

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4P6L \| pdb_00004p6l	Download File View File

Crystal Structure of the Computationally Designed Transmembrane Metallotransporter in Octyl Glucoside

Joh, N.H., Acharya, R., DeGrado, W.F.

(2014) Science 346: 1520-1524

Released	2014-12-24
Method	X-RAY DIFFRACTION 2.803 Å
Organisms	synthetic construct
Macromolecule	Computationally Designed Transporter of Zn(II) and proton (protein)

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5NV9 \| pdb_00005nv9	Download File View File

Substrate-bound outward-open state of a Na+-coupled sialic acid symporter reveals a novel Na+-site

Wahlgren, W.Y., North, R.A., Dunevall, E., Paz, A., Goyal, P., Bisignano, P., Grabe, M., Dobson, R., Abramson, J., Ramaswamy, S., Friemann, R.

(2018) Nat Commun 9: 1753-1753

Released	2018-04-04
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Proteus mirabilis HI4320
Macromolecule	Putative sodium:solute symporter (protein)
Unique Ligands	LMT, NA, PO4, SLB

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5NVA \| pdb_00005nva	Download File View File

Substrate-bound outward-open state of a Na+-coupled sialic acid symporter reveals a novel Na+-site

Wahlgren, W.Y., North, R.A., Dunevall, E., Goyal, P., Grabe, M., Dobson, R., Abramson, J., Ramaswamy, S., Friemann, R.

(2018) Nat Commun 9: 1753-1753

Released	2018-04-04
Method	X-RAY DIFFRACTION 2.26 Å
Organisms	Proteus mirabilis HI4320
Macromolecule	Putative sodium:solute symporter (protein)
Unique Ligands	NA, SLB

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6W7B \| pdb_00006w7b	Download File View File

K2P2.1 (TREK-1), 0 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.88 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	B7G, CD, D10, D12, K, OCT

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6W7C \| pdb_00006w7c	Download File View File

K2P2.1 (TREK-1), 1 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	B7G, CD, D10, D12, K, OCT, R16

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6W7D \| pdb_00006w7d	Download File View File

K2P2.1 (TREK-1), 10 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	1PE, CD, D12, K, LNK, OCT, R16

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6W7E \| pdb_00006w7e	Download File View File

K2P2.1 (TREK-1), 30 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.29 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	1PE, CD, D12, K, LNK, OCT, PIO, R16

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6W82 \| pdb_00006w82	Download File View File

K2P2.1 (TREK-1), 50 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	B7G, CD, D10, D12, K, LNK, OCT, R16

Explore in 3D

6W83 \| pdb_00006w83	Download File View File

K2P2.1 (TREK-1), 100 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.901 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	CD, D10, D12, K, OCT, R16

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6W84 \| pdb_00006w84	Download File View File

K2P2.1 (TREK-1), 200 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.7 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	CD, D12, K, OCT

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6W85 \| pdb_00006w85	Download File View File

K2P2.1 (TREK-1):ML335 complex, 200 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.8 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	CD, D10, K, OCT, Q6F, R16

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6W86 \| pdb_00006w86	Download File View File

K2P2.1 (TREK-1):ML335 complex, 100 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.299 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	CD, D10, D12, K, LNK, OCT, Q6F, R16

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6W87 \| pdb_00006w87	Download File View File

K2P2.1 (TREK-1):ML335 complex, 50 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	CD, D10, D12, K, LNK, OCT, Q6F, R16, UND

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6W88 \| pdb_00006w88	Download File View File

K2P2.1 (TREK-1):ML335 complex, 30 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	CD, D10, D12, K, LNK, OCT, Q6F, R16, UND

Explore in 3D

6W8A \| pdb_00006w8a	Download File View File

K2P2.1 (TREK-1):ML335 complex, 10 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.002 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	16C, CD, D12, K, LNK, Q6F, R16

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6W8C \| pdb_00006w8c	Download File View File

K2P2.1 (TREK-1):ML335 complex, 1 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	11A, B7G, CD, D12, IEP, K, LNK, OCT, Q6F, R16, UND

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6W8F \| pdb_00006w8f	Download File View File

K2P2.1 (TREK-1):ML335 complex, 0 mM K+

Lolicato, M., Minor, D.L.

(2020) Sci Adv 6:

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Mus musculus
Macromolecule	Potassium channel subfamily K member 2 (protein)
Unique Ligands	16C, CD, D12, K, LNK, Q6F, R16

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7JH6 \| pdb_00007jh6	Download File View File

De novo designed two-domain di-Zn(II) and porphyrin-binding protein

Schmidt, N., Liu, L., DeGrado, W.F.

(2020) Proc Natl Acad Sci U S A 117: 33246-33253

Released	2020-12-09
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	synthetic construct
Macromolecule	Two-domain di-Zn(II) and porphyrin-binding protein (protein)
Unique Ligands	2PE, 7BU, ZN

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7PG8 \| pdb_00007pg8	Download File View File

NaV_Ae1/Sp1CTD_pore-ANT05 complex

Lolicato, M., Arrigoni, C.

(2022) Nat Struct Mol Biol 29: 537-548

Released	2022-06-08
Method	X-RAY DIFFRACTION 4.5 Å
Organisms	Alkalilimnicola ehrlichii MLHE-1 Homo sapiens Ruegeria pomeroyi DSS-3
Macromolecule	ANT05 H12 fab fragment, heavy chain (protein) ANT05 H12 fab fragment, light chain (protein) Ion transport protein,Voltage-gated sodium channel (protein)

1 to 25 of 35 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2MUZ | pdb_00002muz

2XQ2 | pdb_00002xq2

4C69 | pdb_00004c69

4MTH | pdb_00004mth

4P6J | pdb_00004p6j

4P6K | pdb_00004p6k

4P6L | pdb_00004p6l

5NV9 | pdb_00005nv9

5NVA | pdb_00005nva

6W7B | pdb_00006w7b

6W7C | pdb_00006w7c

6W7D | pdb_00006w7d

6W7E | pdb_00006w7e

6W82 | pdb_00006w82

6W83 | pdb_00006w83

6W84 | pdb_00006w84

6W85 | pdb_00006w85

6W86 | pdb_00006w86

6W87 | pdb_00006w87

6W88 | pdb_00006w88

6W8A | pdb_00006w8a

6W8C | pdb_00006w8c

6W8F | pdb_00006w8f

7JH6 | pdb_00007jh6

7PG8 | pdb_00007pg8