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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Smallwood, P.M."

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Search Summary

This query matches 13 Structures.

Refinements

Structure Determination Methodology

experimental (13)

Scientific Name of Source Organism

Homo sapiens (13)

Taxonomy

Eukaryota (13)

Experimental Method

X-RAY DIFFRACTION (13)

Polymer Entity Type

Protein (13)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (6)
	2.5 - 3.0 (4)

Release Date

	2010 - 2014 (7)
	2015 - 2019 (4)
	2020 - 2024 (2)

Enzyme Classification Name

Transferases (13)

Symmetry Type

	Asymmetric (13)
	Cyclic (3)

SCOP Classification

	Alpha and beta proteins (a+b) (11)
	Artifacts (3)

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1 to 13 of 13 Structures

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Explore in 3D

3NNU \| pdb_00003nnu	Download File View File

Crystal structure of P38 alpha in complex with DP1376

Abendroth, J.

(2010) Bioorg Med Chem Lett 20: 5793-5798

Released	2010-09-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 14 (protein)
Unique Ligands	EDB

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3NNV \| pdb_00003nnv	Download File View File

Crystal structure of P38 alpha in complex with DP437

Abendroth, J.

(2010) Bioorg Med Chem Lett 20: 5793-5798

Released	2010-09-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 14 (protein)
Unique Ligands	437

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3NNW \| pdb_00003nnw	Download File View File

Crystal structure of P38 alpha in complex with DP802

Abendroth, J.

(2010) Bioorg Med Chem Lett 20: 5793-5798

Released	2010-09-15
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 14 (protein)
Unique Ligands	EDD

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3NNX \| pdb_00003nnx	Download File View File

Crystal structure of phosphorylated P38 alpha in complex with DP802

Abendroth, J.

(2010) Bioorg Med Chem Lett 20: 5793-5798

Released	2010-09-15
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 14 (protein)
Unique Ligands	EDD

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3QRI \| pdb_00003qri	Download File View File

The crystal structure of human abl1 kinase domain in complex with DCC-2036

Chan, W.W., Wise, S.C., Kaufman, M.D., Ahn, Y.M., Ensinger, C.L., Haack, T., Hood, M.M., Jones, J., Lord, J.W., Lu, W.P., Miller, D., Patt, W.C., Smith, B.D., Petillo, P.A., Rutkoski, T.J., Telikepalli, H., Vogeti, L., Yao, T., Chun, L., Clark, R., Evangelista, P., Gavrilescu, L.C., Lazarides, K., Zaleskas, V.M., Stewart, L.J., Van Etten, R.A., Flynn, D.L.

(2011) Cancer Cell 19: 556-568

Released	2011-06-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase ABL1 (protein)
Unique Ligands	919, NA

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3QRJ \| pdb_00003qrj	Download File View File

The crystal structure of human abl1 kinase domain T315I mutant in complex with DCC-2036

(2011) Cancer Cell 19: 556-568

Released	2011-06-01
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase ABL1 (protein)
Unique Ligands	919

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3QRK \| pdb_00003qrk	Download File View File

The crystal structure of human abl1 kinase domain in complex with DP-987

(2011) Cancer Cell 19: 556-568

Released	2011-06-01
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase ABL1 (protein)
Unique Ligands	9DP

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5C9C \| pdb_00005c9c	Download File View File

CRYSTAL STRUCTURE OF BRAF(V600E) IN COMPLEX WITH LY3009120 COMPND

Edwards, T., Abendroth, J., Chun, L.

(2015) Cancer Cell 28: 384-398

Released	2015-07-15
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase B-raf (protein)
Unique Ligands	4Z5, CL

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5DG5 \| pdb_00005dg5	Download File View File

CRYSTAL STRUCTURE OF THE TYROSINE KINASE DOMAIN OF THE HEPATOCYTE GROWTH FACTOR RECEPTOR C-MET IN COMPLEX WITH ALTIRATINIB ANALOG DP-4157

Smith, B.D., Kaufman, M.D., Leary, C.B., Turner, B.A., Wise, S.A., Ahn, Y.M., Booth, R.J., Caldwell, T.M., Ensinger, C.L., Hood, M.M., Lu, W.-P., Patt, T.W., Patt, W.C., Rutkoski, T.J., Samarakoon, T., Telikepalli, H., Vogeti, L., Vogeti, S., Yates, K.M., Chun, L., Stewart, L.J., Clare, M., Flynn, D.L.

(2015) Mol Cancer Ther 14: 2023-2034

Released	2016-08-31
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Hepatocyte growth factor receptor (protein)
Unique Ligands	5B4

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6MOB \| pdb_00006mob	Download File View File

Crystal structure of KIT1 in complex with DP2976 via co-crystallization

Edwards, T.E., Abendroth, J., Safford, K., Chun, L.

(2019) Cancer Cell 35: 738-751.e9

Released	2019-07-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Mast/stem cell growth factor receptor Kit (protein)
Unique Ligands	JWY, NO3

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6MWE \| pdb_00006mwe	Download File View File

CRYSTAL STRUCTURE OF TIE2 IN COMPLEX WITH DECIPERA COMPOUND DP1919

Chun, L., Abendroth, J., Edwards, T.E.

(2017) Mol Cancer Ther 16: 2486-2501

Released	2018-11-21
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	Angiopoietin-1 receptor (protein)
Unique Ligands	919, SO4

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7MFC \| pdb_00007mfc	Download File View File

Crystal structure of CSF1R in complex with vimseltinib

Abendroth, J., Davies, D.R., Atkins, K.

(2021) Mol Cancer Ther 20: 2098-2109

Released	2021-11-24
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Macrophage colony-stimulating factor 1 receptor (protein)
Unique Ligands	Z6V

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7TNH \| pdb_00007tnh	Download File View File

Crystal structure of CSF1R kinase domain in complex with DP-6233

Edwards, T.E., Arakaki, T.L., Chun, L., Flynn, D.L.

(2022) Bioorg Med Chem Lett 74: 128929-128929

Released	2022-08-24
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Macrophage colony-stimulating factor 1 receptor,Fibroblast growth factor receptor 1 chimera (protein)
Unique Ligands	CL, I9W, NA

1 to 13 of 13 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3NNU | pdb_00003nnu

Crystal structure of P38 alpha in complex with DP1376

3NNV | pdb_00003nnv

Crystal structure of P38 alpha in complex with DP437

3NNW | pdb_00003nnw

Crystal structure of P38 alpha in complex with DP802

3NNX | pdb_00003nnx

Crystal structure of phosphorylated P38 alpha in complex with DP802

3QRI | pdb_00003qri

The crystal structure of human abl1 kinase domain in complex with DCC-2036

3QRJ | pdb_00003qrj

The crystal structure of human abl1 kinase domain T315I mutant in complex with DCC-2036

3QRK | pdb_00003qrk

The crystal structure of human abl1 kinase domain in complex with DP-987

5C9C | pdb_00005c9c

CRYSTAL STRUCTURE OF BRAF(V600E) IN COMPLEX WITH LY3009120 COMPND

5DG5 | pdb_00005dg5

CRYSTAL STRUCTURE OF THE TYROSINE KINASE DOMAIN OF THE HEPATOCYTE GROWTH FACTOR RECEPTOR C-MET IN COMPLEX WITH ALTIRATINIB ANALOG DP-4157

6MOB | pdb_00006mob

Crystal structure of KIT1 in complex with DP2976 via co-crystallization

6MWE | pdb_00006mwe

CRYSTAL STRUCTURE OF TIE2 IN COMPLEX WITH DECIPERA COMPOUND DP1919

7MFC | pdb_00007mfc

Crystal structure of CSF1R in complex with vimseltinib

7TNH | pdb_00007tnh

Crystal structure of CSF1R kinase domain in complex with DP-6233

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3NNU | pdb_00003nnu

3NNV | pdb_00003nnv

3NNW | pdb_00003nnw

3NNX | pdb_00003nnx

3QRI | pdb_00003qri

3QRJ | pdb_00003qrj

3QRK | pdb_00003qrk

5C9C | pdb_00005c9c

5DG5 | pdb_00005dg5

6MOB | pdb_00006mob

6MWE | pdb_00006mwe

7MFC | pdb_00007mfc

7TNH | pdb_00007tnh