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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Singh, A."

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Search Summary

This query matches 183 Structures.

Refinements

Structure Determination Methodology

experimental (183)

Scientific Name of Source Organism

	Homo sapiens (29)
	Mycobacterium tuberculosis H37Rv (22)
	Mycolicibacterium smegmatis MC2 155 (11)
	Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 (10)
	Bos taurus (10)
	Pseudomonas aeruginosa PAO1 (10)
	Momordica balsamina (9)
	Neisseria gonorrhoeae (9)
	Solanum lycopersicum (9)
	Camelus dromedarius (7)

More...

Taxonomy

	Bacteria (96)
	Eukaryota (77)
	other sequences (7)
	Riboviria (2)
	Archaea (1)
	Monodnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (176)
	ELECTRON MICROSCOPY (6)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (181)
	DNA (3)
	RNA (3)

Refinement Resolution (Å)

	1.0 - 1.5 (14)
	1.5 - 2.0 (72)
	2.0 - 2.5 (57)
	2.5 - 3.0 (27)
	3.0 - 3.5 (8)
	3.5 - 4.0 (3)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (5)
	2010 - 2014 (67)
	2015 - 2019 (40)
	2020 - 2024 (65)
	2025 - 2029 (4)

Enzyme Classification Name

	Hydrolases (59)
	Oxidoreductases (35)
	Transferases (18)
	Lyases (16)
	Translocases (6)
	Isomerases (2)

Symmetry Type

	Asymmetric (121)
	Cyclic (50)
	Dihedral (15)
	Icosahedral (1)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (60)
	Alpha and beta proteins (a+b) (32)
	Artifacts (27)
	All alpha proteins (11)
	Multi-domain proteins (alpha and beta) (9)
	Coiled coil proteins (1)
	All beta proteins (1)

AllSelected

1 to 25 of 183 Structures

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1PT9 \| pdb_00001pt9	Download File View File

Crystal Structure Analysis of the DIII Component of Transhydrogenase with a Thio-Nicotinamide Nucleotide Analogue

Singh, A., Venning, J.D., Quirk, P.G., van Boxel, G.I., Rodrigues, D.J., White, S.A., Jackson, J.B.

(2003) J Biological Chem 278: 33208-33216

Released	2003-10-07
Method	X-RAY DIFFRACTION 2.42 Å
Organisms	Homo sapiens
Macromolecule	NAD(P) transhydrogenase, mitochondrial (protein)
Unique Ligands	GOL, SO4, TAP

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1PTJ \| pdb_00001ptj	Download File View File

Crystal structure analysis of the DI and DIII complex of transhydrogenase with a thio-nicotinamide nucleotide analogue

Singh, A., Venning, J.D., Quirk, P.G., van Boxel, G.I., Rodrigues, D.J., White, S.A., Jackson, J.B.

(2003) J Biological Chem 278: 33208-33216

Released	2003-10-07
Method	X-RAY DIFFRACTION 2.61 Å
Organisms	Rhodospirillum rubrum
Macromolecule	NAD(P) transhydrogenase subunit alpha part 1 (protein) NAD(P) transhydrogenase subunit beta (protein)
Unique Ligands	GOL, NAP, SND

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1U28 \| pdb_00001u28	Download File View File

R. rubrum transhydrogenase asymmetric complex (dI.NAD+)2(dIII.NADP+)1

Mather, O.C., Singh, A., van Boxel, G.I., White, S.A., Jackson, J.B.

(2004) Biochemistry 43: 10952-10964

Released	2005-01-18
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Rhodospirillum rubrum
Macromolecule	NAD(P) transhydrogenase subunit alpha part 1 (protein) NAD(P) transhydrogenase subunit beta (protein)
Unique Ligands	GOL, NAD, NAP

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1U2D \| pdb_00001u2d	Download File View File

Structre of transhydrogenaes (dI.NADH)2(dIII.NADPH)1 asymmetric complex

Mather, O.C., Singh, A., van Boxel, G.I., White, S.A., Jackson, J.B.

(2004) Biochemistry 43: 10952-10964

Released	2005-01-25
Method	X-RAY DIFFRACTION 3 Å
Organisms	Rhodospirillum rubrum
Macromolecule	NAD(P) transhydrogenase subunit alpha part 1 (protein) NAD(P) transhydrogenase subunit beta (protein)
Unique Ligands	GOL, NAD, NDP

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1U2G \| pdb_00001u2g	Download File View File

transhydrogenase (dI.ADPr)2(dIII.NADPH)1 asymmetric complex

Mather, O.C., Singh, A., van Boxel, G.I., White, S.A., Jackson, J.B.

(2004) Biochemistry 43: 10952-10964

Released	2005-01-25
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Rhodospirillum rubrum
Macromolecule	NAD(P) transhydrogenase subunit alpha part 1 (protein) NAD(P) transhydrogenase subunit beta (protein)
Unique Ligands	APR, GOL, NDP

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1U31 \| pdb_00001u31	Download File View File

recombinant human heart transhydrogenase dIII bound with NADPH

Mather, O.C., Singh, A., van Boxel, G.I., White, S.A., Jackson, J.B.

(2004) Biochemistry 43: 10952-10964

Released	2005-01-25
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	NAD(P) transhydrogenase, mitochondrial (protein)
Unique Ligands	GOL, NDP, SO4

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2G9J \| pdb_00002g9j	Download File View File

Complex of TM1a(1-14)Zip with TM9a(251-284): a model for the polymerization domain ("overlap region") of tropomyosin, Northeast Structural Genomics Target OR9

Greenfield, N.J., Huang, Y.J., Swapna, G.V.T., Bhattacharya, A., Singh, A., Montelione, G.T., Hitchcock-DeGregori, S.E., Northeast Structural Genomics Consortium (NESG)

(2006) J Mol Biology 364: 80-96

Released	2006-11-07
Method	SOLUTION NMR
Organisms	Rattus norvegicus Saccharomyces cerevisiae
Macromolecule	Tropomyosin 1 alpha chain (protein) Tropomyosin 1 alpha chain/General control protein GCN4 (protein)

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3LP9 \| pdb_00003lp9	Download File View File

Crystal structure of LS24, A Seed Albumin from Lathyrus sativus

Gaur, V., Qureshi, I.A., Singh, A., Chanana, V., Salunke, D.M.

(2010) Plant Physiol 152: 1842-1850

Released	2010-02-23
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Lathyrus sativus
Macromolecule	LS-24 (protein)
Unique Ligands	CA, CL, NA, SPM

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3ND3 \| pdb_00003nd3	Download File View File

Uhelix 16-mer dsRNA

Mooers, B.H., Singh, A.

(2011) RNA 17: 1870-1883

Released	2011-09-21
Method	X-RAY DIFFRACTION 1.37 Å
Macromolecule	5'-R(APGPAPGPAPAPGPAPUPUPUPUPUPUPUPU)-3' (nucleic acid)
Unique Ligands	K, NA

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3ND4 \| pdb_00003nd4	Download File View File

Watson-Crick 16-mer dsRNA

Mooers, B.H., Singh, A.

(2011) RNA 17: 1870-1883

Released	2011-09-21
Method	X-RAY DIFFRACTION 1.524 Å
Macromolecule	5'-R(APGPAPGPAPAPGPAPUPCPUPUPCPUPCPU)-3' (nucleic acid)
Unique Ligands	K, MG, NA

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3O4K \| pdb_00003o4k	Download File View File

Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) and lipoteichoic acid at 2.1 A resolution

Sharma, P., Dube, D., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

(2011) J Biological Chem 286: 16208-16217

Released	2010-08-25
Method	X-RAY DIFFRACTION 2.11 Å
Organisms	Camelus dromedarius
Macromolecule	Peptidoglycan recognition protein 1 (protein)
Unique Ligands	GOL, LTC, TLA

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3O9N \| pdb_00003o9n	Download File View File

Crystal Structure of a new form of xylanase-A-amylase inhibitor protein(XAIP-III) at 2.4 A resolution

Singh, A., Kumar, S., Sinha, M., Sharma, S., Singh, T.P.

To be published

Released	2010-09-22
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Scadoxus multiflorus
Macromolecule	Haementhin (protein)
Unique Ligands	ACT, PO4

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3OSZ \| pdb_00003osz	Download File View File

Crystal Structure of the complex of proteinase K with an antimicrobial nonapeptide, at 2.26 A resolution

Singh, A., Sinha, M., Bhushan, A., Kaur, P., Srinivasan, A., Sharma, S., Singh, T.P.

To be published

Released	2010-10-06
Method	X-RAY DIFFRACTION 2.26 Å
Organisms	Parengyodontium album
Macromolecule	10-mer peptide (protein) Proteinase K (protein)
Unique Ligands	CA, NO3

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3P2J \| pdb_00003p2j	Download File View File

Crystal structure of peptidyl-tRNA hydrolase from Mycobacterium smegmatis at 2.2 A resolution

Kumar, A., Singh, A., Yadav, R., Sinha, M., Arora, A., Sharma, S., Singh, T.P.

To be published

Released	2010-11-17
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	Peptidyl-tRNA hydrolase (protein)

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3PS7 \| pdb_00003ps7	Download File View File

Biochemical studies and crystal structure determination of dihydrodipicolinate synthase from Pseudomonas aeruginosa

Kaur, N., Gautam, A., Kumar, S., Singh, A., Singh, N., Sharma, S., Sharma, R., Tewari, R., Singh, T.P.

(2011) Int J Biol Macromol 48: 779-787

Released	2010-12-15
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Dihydrodipicolinate synthase (protein)
Unique Ligands	PGO

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3PUO \| pdb_00003puo	Download File View File

Crystal structure of dihydrodipicolinate synthase from Pseudomonas aeruginosa(PsDHDPS)complexed with L-lysine at 2.65A resolution

Kaur, N., Kumar, M., Kumar, S., Gautam, A., Sinha, M., Kaur, P., Sharma, S., Sharma, R., Tewari, R., Singh, T.P.

(2011) Int J Biol Macromol 48: 779-787

Released	2010-12-29
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Dihydrodipicolinate synthase (protein)
Unique Ligands	GOL, LYS

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3RK8 \| pdb_00003rk8	Download File View File

Crystal structure of the chloride inhibited dihydrodipicolinate synthase from Acinetobacter baumannii complexed with pyruvate at 1.8 A resolution

Kaushik, S., Singh, A., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-04-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841
Macromolecule	Dihydrodipicolinate synthase (protein)
Unique Ligands	CL, GOL, PEG, PYR

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3RT4 \| pdb_00003rt4	Download File View File

Structural Basis of Recognition of Pathogen-associated Molecular Patterns and Inhibition of Proinflammatory Cytokines by Camel Peptidoglycan Recognition Protein

Sharma, P., Dube, D., Singh, A., Mishra, B., Singh, N., Sinha, M., Dey, S., Kaur, P., Mitra, D.K., Sharma, S., Singh, T.P.

(2011) J Biological Chem 286: 16208-16217

Released	2011-06-15
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Camelus dromedarius
Macromolecule	Peptidoglycan recognition protein 1 (protein)
Unique Ligands	LP5, TLA

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3SVN \| pdb_00003svn	Download File View File

Crystal structure of mKate S158A mutant at pH 7.5

Wang, Q., Byrnes, L., Sondermann, H.

(2011) PLoS One 6: e23513-e23513

Released	2011-09-14
Method	X-RAY DIFFRACTION 1.899 Å
Organisms	synthetic construct
Macromolecule	mKate (protein)

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3SVO \| pdb_00003svo	Download File View File

Crystal structure of mKate mutant S158A/S143C at pH 10.0

Wang, Q., Byrnes, L., Sondermann, H.

(2011) PLoS One 6: e23513-e23513

Released	2011-09-14
Method	X-RAY DIFFRACTION 1.984 Å
Organisms	synthetic construct
Macromolecule	mKate S158A/S143C (protein)

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3SVR \| pdb_00003svr	Download File View File

Crystal structure of mkate mutant S158A/S143C at pH 7.5

Wang, Q., Byrnes, L., Sondermann, H.

(2011) PLoS One 6: e23513-e23513

Released	2011-09-14
Method	X-RAY DIFFRACTION 1.907 Å
Organisms	synthetic construct
Macromolecule	mkate S158A/S143C (protein)

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3SVS \| pdb_00003svs	Download File View File

Crystal structure of mkate mutant S158A/S143C at pH 4.0

Wang, Q., Bynres, L., Sondermann, H.

(2011) PLoS One 6: e23513-e23513

Released	2011-09-14
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	synthetic construct
Macromolecule	mKate S158A/S143C (protein)

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3SVU \| pdb_00003svu	Download File View File

Crystal structure of mKate mutant S143C

Wang, Q., Byrnes, L., Sondermann, H.

(2011) PLoS One 6: e23513-e23513

Released	2011-09-14
Method	X-RAY DIFFRACTION 2.695 Å
Organisms	synthetic construct
Macromolecule	mkate S143C (protein)

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3T2V \| pdb_00003t2v	Download File View File

Crystal structure of the complex of peptidoglycan recognition protein-short (CPGRP-S) with mycolic acid at 2.5 A resolution

Sharma, P., Dube, D., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

(2013) Arch Biochem Biophys 529: 1-10

Released	2011-08-10
Method	X-RAY DIFFRACTION 2.51 Å
Organisms	Camelus dromedarius
Macromolecule	Peptidoglycan recognition protein 1 (protein)
Unique Ligands	GOL, KKJ, TLA

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3TAK \| pdb_00003tak	Download File View File

Crystal structure of the complex of DHDPS from Acinetobacter baumannii with Pyruvate at 1.4 A resolution

Singh, A., Kaushik, S., Sinha, M., Tewari, R., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-08-24
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841
Macromolecule	Dihydrodipicolinate synthase (protein)
Unique Ligands	GOL, PEG, PYR

1 to 25 of 183 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1PT9 | pdb_00001pt9

1PTJ | pdb_00001ptj

1U28 | pdb_00001u28

1U2D | pdb_00001u2d

1U2G | pdb_00001u2g

1U31 | pdb_00001u31

2G9J | pdb_00002g9j

3LP9 | pdb_00003lp9

3ND3 | pdb_00003nd3

3ND4 | pdb_00003nd4

3O4K | pdb_00003o4k

3O9N | pdb_00003o9n

3OSZ | pdb_00003osz

3P2J | pdb_00003p2j

3PS7 | pdb_00003ps7

3PUO | pdb_00003puo

3RK8 | pdb_00003rk8

3RT4 | pdb_00003rt4

3SVN | pdb_00003svn

3SVO | pdb_00003svo

3SVR | pdb_00003svr

3SVS | pdb_00003svs

3SVU | pdb_00003svu

3T2V | pdb_00003t2v

3TAK | pdb_00003tak