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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

QUERY: Citation Author = "Mentzer, A.J."

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This query matches 101 Structures.

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7BEH	Download File View File

Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-316 Fab

Zhou, D., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-316 heavy chain (protein) COVOX-316 light chain (protein) Spike glycoprotein (protein)
Unique Ligands	GOL, TRS
Unique branched monosaccharides	FUC, NAG

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7BEI	Download File View File

Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-150 Fab

Zhou, D., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-150 heavy chain (protein) COVOX-150 light chain (protein) Spike glycoprotein (protein)
Unique Ligands	CL, NO3
Unique branched monosaccharides	FUC, NAG

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7BEJ	Download File View File

Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-158 Fab (crystal form 1)

Zhou, D., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	X-RAY DIFFRACTION 2.42 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-158 heavy chain (protein) COVOX-158 light chain (protein) Spike glycoprotein (protein)
Unique Ligands	FMT, GOL
Unique branched monosaccharides	FUC, NAG

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7BEK	Download File View File

Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-158 Fab (crystal form 2)

Zhou, D., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-158 heavy chain (protein) COVOX-158 light chain (protein) Spike glycoprotein (protein)
Unique Ligands	CL, GOL, PEG, SO4, TRS
Unique branched monosaccharides	FUC, NAG

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7BEL	Download File View File

Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-88 and COVOX-45 Fabs

Zhou, D., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	X-RAY DIFFRACTION 2.53 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-45 heavy chain (protein) COVOX-45 light chain (protein) COVOX-88 heavy chain (protein) COVOX-88 light chain (protein) Spike glycoprotein (protein)
Unique Ligands	ACT, GOL, NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7BEM	Download File View File

Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 scFv

Zhou, D., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	X-RAY DIFFRACTION 2.52 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-269 Vh domain (protein) COVOX-269 Vl domain (protein) Spike glycoprotein (protein)
Unique Ligands	CL, GOL, PO4, PRO
Unique branched monosaccharides	FUC, NAG

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7BEN	Download File View File

Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-253 and COVOX-75 Fabs

Zhou, D., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-253 heavy chain (protein) COVOX-253 light chain (protein) COVOX-75 heavy chain (protein) COVOX-75 light chain (protein) Spike glycoprotein (protein)
Unique Ligands	BR, GOL, IMD, IOD, PEG, PG6
Unique branched monosaccharides	FUC, NAG

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7BEO	Download File View File

Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-253H55L and COVOX-75 Fabs

Zhou, D., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	X-RAY DIFFRACTION 3.19 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-253H55L heavy chain (protein) COVOX-253H55L light chain (protein) COVOX-75 heavy chain (protein) COVOX-75 light chain (protein) Spike glycoprotein (protein)
Unique Ligands	ACT, CL, GOL, NAG
Unique branched monosaccharides	FUC, NAG

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7BEP	Download File View File

Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-384 and S309 Fabs

Zhou, D., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	X-RAY DIFFRACTION 2.61 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-384 heavy chain (protein) COVOX-384 light chain (protein) S309 heavy chain (protein) S309 light chain (protein) Spike glycoprotein (protein)
Unique Ligands	CL, GLU, GLY, GOL, IMD, PEG, PG4, PGE
Unique branched monosaccharides	BMA, FUC, MAN, NAG

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7ND3	Download File View File

EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-40 Fab

Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-40 heavy chain (protein) COVOX-40 light chain (protein) Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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7ND4	Download File View File

EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-88 Fab

Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	ELECTRON MICROSCOPY 3.6 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-88 Fab heavy chain (protein) COVOX-88 Fab light chain (protein) Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7ND5	Download File View File

EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-150 Fab

Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-150 Fab heavy chain (protein) COVOX-150 Fab light chain (protein) Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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7ND6	Download File View File

EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-40 Fab

Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	ELECTRON MICROSCOPY 7.3 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-158 Fab heavy chain (protein) COVOX-158 Fab light chain (protein) Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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7ND7	Download File View File

EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-316 Fab

Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	ELECTRON MICROSCOPY 3.6 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-316 Fab heavy chain (protein) COVOX-316 Fab light chain (protein) Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	FUC, NAG

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7ND8	Download File View File

EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-384 Fab

Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-384 Fab heavy chain (protein) COVOX-384 Fab light chain (protein) Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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7ND9	Download File View File

EM structure of SARS-CoV-2 Spike glycoprotein (one RBD up) in complex with COVOX-253H55L Fab

Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-253H55L Fab heavy chain (protein) COVOX-253H55L Fab light chain (protein) Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	FUC, NAG

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7NDA	Download File View File

EM structure of SARS-CoV-2 Spike glycoprotein (all RBD down) in complex with COVOX-253H55L Fab

Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-253H55L Fab heavy chain (protein) COVOX-253H55L Fab light chain (protein) Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	FUC, NAG

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7NDB	Download File View File

EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-253H165L Fab

Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	ELECTRON MICROSCOPY 4.6 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-253H165L Fab heavy chain (protein) COVOX-253H165L Fab light chain (protein) Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	FUC, NAG

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7NDC	Download File View File

EM structure of SARS-CoV-2 Spike glycoprotein (all RBD down) in complex with COVOX-159

Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-159 Fab light chain (protein) COVOX-159 heavy Fab chain (protein) Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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7NDD	Download File View File

EM structure of SARS-CoV-2 Spike glycoprotein (one RBD up) in complex with COVOX-159

Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.

(2021) Cell 184: 2183

Released	2021-03-03
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-159 Fab heavy chain (protein) COVOX-159 Fab light chain (protein) Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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7NEG	Download File View File

Crystal structure of the N501Y mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 Fab

Zhou, D., Ren, J., Stuart, D.

(2021) Cell 184: 2201

Released	2021-03-03
Method	X-RAY DIFFRACTION 2.19 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	Antibody COVOX-269 Fab heavy chain (protein) Antibody COVOX-269 Fab light chain (protein) Surface glycoprotein (protein)
Unique Ligands	GOL, SO4
Unique branched monosaccharides	FUC, NAG

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7NEH	Download File View File

Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 Fab

Zhou, D., Ren, J., Stuart, D.

(2021) Cell 184: 2201

Released	2021-03-03
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-269 Fab heavy chain (protein) COVOX-269 fab light chain (protein) Spike glycoprotein (protein)
Unique Ligands	CL, EDO, NO3, PEG, SO4
Unique branched monosaccharides	FUC, NAG

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7NX6	Download File View File

Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-222 and EY6A Fabs

Zhou, D., Ren, J., Stuart, D.

(2021) Cell 184: 2939

Released	2021-04-07
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-222 Fab Heavy chain (protein) COVOX-222 Fab light chain (protein) EY6A Fab heavy chain (protein) EY6A Fab light chain (protein) Spike protein S1 (protein)
Unique Ligands	CL, GOL, NAG, SO4

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7NX7	Download File View File

Crystal structure of the K417N mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-222 and EY6A Fabs

Zhou, D., Ren, J., Stuart, D.

(2021) Cell 184: 2939

Released	2021-04-07
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-222 Fab heavy chain (protein) COVOX-222 Fab light chain (protein) EY6A Fab heavy chain (protein) EY6A Fab light chain (protein) Spike protein S1 (protein)
Unique Ligands	CIT, CL, GOL, NAG, SO4

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7NX8	Download File View File

Crystal structure of the K417T mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-222 and EY6A Fabs

Zhou, D., Ren, J., Stuart, D.

(2021) Cell 184: 2939

Released	2021-04-07
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	COVOX-222 Fab heavy chain (protein) COVOX-222 Fab light chain (protein) EY6A Fab heavy chain (protein) EY6A Fab light chain (protein) Spike protein S1 (protein)
Unique Ligands	CIT, CL, GOL, NAG, PEG, SO4